Commit 5b626cc6 authored by Thonier Florian's avatar Thonier Florian Committed by Mathieu Giraud

germline, add Gallus Gallus germline *.g file

link to #3910
parent af2af318
{
"ref": "http://www.vidjil.org/germlines/germline-xxx.tar.gz",
"species": "Gallus gallus; including red junglefowl",
"species_taxon_id": 9031,
"path": "gallus-gallus",
"systems": {
"IGH": {
"shortcut": "H",
"color" : "#6c71c4",
"description": "Gallus immunoglobulin, heavy locus",
"recombinations": [ {
"5": ["IGHV.fa"],
"4": ["IGHD.fa"],
"3": ["IGHJ.fa"]
} ],
"parameters": {
"seed": "12s"
}
},
"IGH+": {
"shortcut": "h",
"color" : "#8c91e4",
"description": "Gallus immunoglobulin, heavy locus, incomplete Dh-Jh recombinations",
"follows": "IGH",
"recombinations": [ {
"5": ["IGHD+up.fa"],
"3": ["IGHJ+down.fa"]
} ],
"parameters": {
"seed": "12s"
}
},
"IGL": {
"shortcut": "L",
"color" : "#d33682",
"description": "Gallus immunoglobulin, lambda locus",
"recombinations": [ {
"5": ["IGLV.fa"],
"3": ["IGLJ.fa"]
} ],
"parameters": {
"seed": "10s"
}
}
}
}
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