Commit 58532415 authored by Mathieu Giraud's avatar Mathieu Giraud Committed by Mikael Salson

tests: testing compressed .fa.gz input

parent 9cb028d2
!LAUNCH: ../../vidjil -G ../../germline/IGH ../../data/clones_simul.fa > out-fa ; ../../vidjil -G ../../germline/IGH -b clones_simul ../../data/clones_simul.fa.gz > out-fa-gz ; diff -s -I '\#' -I 'index' -I 'data/clones_simul' out-fa out-fa-gz ; wc -l out-fa-gz
$ Identical output
1: out-fa .* out-fa-gz .* identical
$ Testing out-fa-gz has approximately 69 lines
1: [67]. out-fa-gz
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