Commit 55f35c3f authored by Mathieu Giraud's avatar Mathieu Giraud

doc/algo.org: update, LIL-L4.fastq.gz

parent c08d1b68
......@@ -754,7 +754,7 @@ This file will be relatively small (a few kB or MB) and can be taken again as an
** Advanced usage
#+BEGIN_SRC sh
./vidjil-algo -c clones -g germline/homo-sapiens.g -r 1 -n 5 -x 10000 demo/LIL-L4.fa
./vidjil-algo -c clones -g germline/homo-sapiens.g -r 1 -n 5 -x 10000 demo/LIL-L4.fastq.gz
# Extracts the windows with at least 1 read each (-r 1, the default being -r 5)
# on the first 10,000 reads, then cluster them into clones
# with a second clustering step at distance five (-n 5)
......
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