Commit 525612b1 authored by Mikaël Salson's avatar Mikaël Salson

algo: Remove unused variables

Remove compiler warnings

See #1233
parent a010d641
......@@ -88,7 +88,6 @@ BioReader filterBioReaderWithACAutomaton(
};
// Use a set to use the comparator and sort function
set<pair<KmerAffect, int>, Comparator> setOfWords(mapAho.begin(), mapAho.end(), compFunctor);
set<pair<KmerAffect, int>, Comparator>::iterator setIt = setOfWords.begin();
// Iterate over the pair and not the map
int nbKmers = 0, previousOccurences = 0;
for(pair<KmerAffect, int> element : setOfWords){
......
......@@ -288,8 +288,6 @@ int main (int argc, char **argv)
string windows_labels_file = "" ;
bool only_labeled_windows = false ;
char c ;
int options_s_k = 0 ;
double expected_value = THRESHOLD_NB_EXPECTED;
......@@ -403,7 +401,7 @@ int main (int argc, char **argv)
app.add_option("-t",
[&](CLI::results_t res) {
bool worked = CLI::detail::lexical_cast(res[0], trim_sequences);
CLI::detail::lexical_cast(res[0], trim_sequences);
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trim_sequences_changed = true;
return true;
},
......
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