Commit 3edd2f48 authored by Mathieu Giraud's avatar Mathieu Giraud

doc/algo.org: diversity measures, warning

parent 8241a674
......@@ -466,6 +466,8 @@ Several [[https://en.wikipedia.org/wiki/Diversity_index][diversity indices]] are
E ans Ds values are between 0 (no diversity, one clone gathers all analyzed reads)
and 1 (full diversity, each analyzed read belongs to a different clone).
These values are now computed on the windows, before any further clustering.
PCR and sequencing errors can thus lead to slighlty over-estimate the diversity.
** Unsegmentation causes
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