0000-nck-TRD+.should-vdj.fa 2.06 KB
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>TRDD2 3/7/0 TRDD3  [TRD+]
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gcgGGTGGtGATGGCAAAGTGCCAAGGAAAGGGAAAAAGGAAGAAGAGGGTTTTTATACTGATGTGTTTCATTGTGCCTTCCCCCCCCTACTGGGGGAtACGCACAGTGCTACAAAACCTACAgAGACCTGTACAAAAACTGCAGGGGCAAAAGTGCCATTTCCCTGGGATATCCTCACCCTGGGTcCcaaa
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>TRDD2 1/3/15 TRDD3  [TRD+]
AgcgggtggtgatggcaaagtgccaaggaaagggaaaaaggaagaagagggtttttatactgatgtgtttCattgtgCCTTCCTATGGcagtgctacaaaacctacagagacctgtacaaaaactgcaggggcaaaagtgccatttccctgggatatcctcaccctgggtcccatgcctcaggagacaaacacagcaagcagcttccctc
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>TRDD2 0/0/9 TRDD3  [TRD+]
AgcgggtggtgatggcaaagtgccaaggaaagggaaaaaggaagaagagggtttttatactgatgtgtttCattgtgCCTTCCTACTACGcacagtgctacaaaacctacagagacctgtacaaaaactgcaggggcaaaagtgccatttccctgggatatcctcaccctgggtcccatgcctcaggagacaaacacagcaagcagcttccctc

>TRDV2 0/7/0 TRDD3  [TRD+]
GAAtcGAtAttGCAAAGAACCtGGCtGtACttAAGatACttGCACCAtCAGaGaGaGAtGAAGgGtCttACtACtGtGCCtGtGACACCCCCCtGTACtGGGGGAtACGCACAGtGCtACAAAACCtACAGAGACCtGTACAAAAACtGCAGGGGCAAAAGtGCCATttCCCtGGGAtAtCCtCACCCtGGGTCCCAA
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############################
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# DDJ
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# seq      65  GTGTTTCATTGTGCCTTCCTACGTGAGGGGGATACGCCCCGATAAACTCATCTTTG
#              ||||||||||||||||||||||
# TRDD2*01     GTGTTTCATTGTGCCTTCCTAC    ||||||||||
# TRDD3                               ACTGGGGGATACG  ||||||||||||||||||
# TRDJ1*01                                        acaccgataaactcatctttg
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>TRDD2*01 0/GTGA/3 TRDD3 0/CC/3 TRDJ1*01  [TRD+]
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AgcgggtggtgatggcaaagtgccaaggaaagggaaaaaggaagaagagggtttttatactgatgTGTTTCATTGTGCCTTCCTAC
GTGA
GGGGGATACG
CC
CCGATAAACTCATCTTTGGAAAAGGAACCCGTGTGACTGTGGAAC
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>TRDD2 18/6/0 TRDD3 5/5/0 TRDJ1  [TRD+] TODO
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AgcgggtggtgatggcaaagtgccaaggaaagggaaaaaggaagaagagggtttttatactgatgtgtCCAGGGACTGGGGGCCAGTACACCGATAAACTCATCTTTGGAAAAGGAACCCGTGTGACTGTGGAAC

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>TRDD2*01 5/TTTCACAGACGAG/2 TRDD3*01 6/ACTC/0 TRDJ1*01  [TRD+] TODO
AGGGGTATTGTGGATGGCAGCGGGTGGTGATGGCAAAGTGCCAAGGAAAGGGAAAAAGGAAGAAGAGGGTTTTTATACTGATGTGTTTCATTGTGCCTTTTTCACAGACGAGTGGGGACTCACACCGATAAACTCATCTTTGGAAAAGGAACCCGTGTGACTGTGGAA

>TRDD2*01 0/GGT/0 TRDD3*01 7/CC/7 TRDJ1*01  [TRD+] TODO
AGGGGTATTGTGGATGGCAGCGGGTGGTGATGGCAAAGTGCCAAGGAAAGGGAAAAAGGAAGAAGAGGGTTTTTATACTGATGTGTTTCATTGTGCCTTCCTACGGTACTGGGCCTAAACTCATCTTTGGAAAAGGAACCCGTGTGACTGTGGAA