homo-sapiens-isotypes.g 1.64 KB
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{
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    "ref": "http://www.vidjil.org/germlines/germline-46.tar.gz",

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    "species": "Homo sapiens",
    "species_taxon_id": 9606,

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    "path": "homo-sapiens",

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    "systems": {

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        "IgVC": {
            "shortcut": "C",
            "color" : "#6c71c4",
            "description": "Human immunoglobulin, heavy locus (14q32.33), with constant heavy chains",
            "recombinations": [ {
                "5": ["IGHV.fa"],
                "4": ["IGHJ.fa"],
                "3": ["IGHC=M.fa",
                      "IGHC=D.fa",
                      "IGHC=G3.fa",
                      "IGHC=G1.fa",
                      "IGHC=A1.fa",
                      "IGHC=G2.fa",
                      "IGHC=G4.fa",
                      "IGHC=E.fa",
                      "IGHC=A2.fa",
                      "IGHC=GP.fa"
                     ]
            } ],
            "parameters": {
                "seed": "12s"
            }
        },
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        "IgJC": {
            "shortcut": "c",
            "color" : "#8c91e4",
            "description": "Human immunoglobulin, heavy locus (14q32.33), with constant heavy chains",
            "recombinations": [ {
                "5": ["IGHJ.fa"],
                "3": ["IGHC=M.fa",
                      "IGHC=D.fa",
                      "IGHC=G3.fa",
                      "IGHC=G1.fa",
                      "IGHC=A1.fa",
                      "IGHC=G2.fa",
                      "IGHC=G4.fa",
                      "IGHC=E.fa",
                      "IGHC=A2.fa",
                      "IGHC=GP.fa"
                     ]
            } ],
            "parameters": {
                "seed": "12s"
            }
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        }
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    }
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}