#+TITLE: Vidjil credits

Vidjil is an open-source platform for the analysis of high-throughput sequencing data from lymphocytes,
developed by the Bonsai bioinformatics lab, at CRIStAL (UMR CNRS 9189, Université Lille) and Inria Lille.

Contact: Mathieu Giraud and Mikaël Salson <contact@vidjil.org>

* Vidjil core development
 - Mathieu Giraud, 2011-2015
 - Mikaël Salson, 2011-2015
 - Marc Duez, 2012-2015
 - Tatiana Rocher, 2014-2015
 - Florian Thonier, 2015

* Other contributors
 - David Chatel, 2011-2012
 - Antonin Carette, 2014

* .should-vdj.fa tests with curated V(D)J designations
 - Yann Ferret (CHRU Lille), 2014-2015
 - Florian Thonier (Inserm, Paris Necker), 2015

* Acknowledgements

We thank all our users, collaborators and colleagues who provided feedback on Vidjil and proposed new ideas.
Our special thanks go to:
- Marine Armand
- Jack Bartram
- Aurélie Caillault
- Yann Ferret
- Alice Fievet
- Martin Figeac
- Nathalie Grardel
- Michaela Kotrová
- Claude Preudhomme
- Shéhérazade Sebda

Vidjil is developed in collaboration or in connection with the following groups:
 - department of Hematology of CHRU Lille
 - Functional and Structural Genomic Platform (U. Lille 2, IFR-114, IRCL)
 - Institut Necker Enfants Malades, Paris
 - EuroClonality-NGS working group

* Funding

The development of Vidjil is funded by:
 - Région Nord-Pas-de-Calais, 2012-2017
 - Université Lille 1, 2014-2017
 - SIRIC ONCOLille (Grant INCa-DGOS-Inserm 6041), 2014-2016
 - Inria Lille, 2015-2017

* Reference

Mathieu Giraud, Mikaël Salson, et al.,
"Fast multiclonal clusterization of V(D)J recombinations from high-throughput sequencing",
BMC Genomics 2014, 15:409
http://dx.doi.org/10.1186/1471-2164-15-409