site_name: Vidjil docs_dir: doc plugins: [] repo_url: https://gitlab.inria.fr/vidjil/vidjil repo_name: gitlab nav: - / : index.md - Life scientist: - Web application user manual: user.md - Libraries and recombinations: locus.md - Tutorial "Mastering the Vidjil web application" 🔗: http://www.vidjil.org/doc/tutorial/mastering-vidjil.html - Demo access to app.vidjil.org 🔗: http://app.vidjil.org/ - Bioinformatician: - vidjil-algo, command-line manual: vidjil-algo.md - fuse.py, converting and merging immune repertoire data: tools.md - Specification of the .vidjil format: vidjil-format.md - Specification of the warnings: warnings.md - Specification of the .should-vdj.fa tests: should-vdj.md - Further developer documentation: /#further-developer-documentation - Server administrator: - Server administration (web): admin.md - Server installation and maintenance (docker): server.md - Further developer documentation: /#further-developer-documentation - Quality, roadmap, credits: - Software and development quality: quality.md - Public datasets supporting Vidjil publications 🔗: http://www.vidjil.org/data - Roadmap: roadmap.md - Credits, references: credits.md extra_css: - mkdocs-extra.css