/* base Vidjil style */
/* @default, @background, @highlight, @select, @secondary and @border have to be defined */

@infoContainerHeight : 32px;
@locusSpacingMargin : 12px;

/* default tag color */
@tagColor0 : #DC322F;
@tagColor1 : #cb4b16;
@tagColor2 : #b58900;
@tagColor3 : #268bd2;
@tagColor4 : #6c71c4;
@tagColor5 : #2aa198;
@tagColor6 : #d33682;
@tagColor7 : #859900;


html{
  height: 100%;
  padding: 0px;
  margin: 0px;
  min-width: 1160px;
  min-height: 250px
}

body, svg {
  font-family: @default-font;
  font-size: 13px;
  height : 100%;
  margin:0px;
  color : @default;
  background : @border;
}

.cloneName {
  font-family: @bold-font;
}

.seq-fixed .cloneName, .listElem .cloneName {
  bottom: 1px;
}

/* for FF override */
textarea {
  font-family: @default-font;
  font-size: 100%;
}

/* texts that are not sequences nor identifiers */

#info, .popup_msg, .menu, .menu a
{
}


h2
{
  margin-top: 2px;
}

ul{
  padding-left:2px;
  margin-top: 3px;
  list-style-type: none;
}

#visu-container{
  -khtml-user-select: none;
  -webkit-user-select: none;
  -moz-user-select: -moz-none;
  -ms-user-select: none;
  user-select: none;
  height :100%;
  margin : auto;
  overflow : hidden;
  background : @background;
}

#top-container {
  height: @top_container_height;
  width: 100%;
  background: @background;
  position : fixed;
  z-index:1;
}

#upload_summary {
  float: right;
  display:none;
  margin-right: 200px;
  position: relative;
  right: 200px;
  z-index: 10;
  background-color: @background;
}

.upload_field {
  width: 100%;
}

#menu-container {
    background: inherit;
}

.scatterplot, .graph{
  -khtml-user-select: none;
  -webkit-user-select: none;
  -moz-user-select: -moz-none;
  -ms-user-select: none;
  user-select: none;
  overflow:hidden;
}

#mid-container {
  position : fixed;
  top : @top_container_height;
  bottom : 125px ;
  width: -moz-calc(~"100%" - @margin + @margin);
  width: -webkit-calc(~"100%" - @margin + @margin);
  width: calc(~"100%" - @margin + @margin);
  overflow: hidden;
  background: @background;
  margin: @margin;
}

#right-container{
  -khtml-user-select: none;
  -webkit-user-select: none;
  -moz-user-select: -moz-none;
  -ms-user-select: none;
  user-select: none;
  float : right;
  width : 0px;
}

#left-container {
  height:100%;
  width : @width_left_container;
  float : left;
  overflow-y : none;
  -khtml-user-select: auto;
  -webkit-user-select: auto;
  -moz-user-select: auto;
  -ms-user-select: auto;
  user-select: auto;
  display : table;
}

#visu, #visu2 {
  height : 50%;
  width : 100%;
}

#visu2 {
max-height: calc(~"100%" - @margin)
}

line {
  stroke: @secondary;
  stroke-width: 0.5;
}

                        /* left-container - info */

#info-row{
    height : 200px;
    display : table-row;
}

#info{
  font-size: 13px;
  padding:3px;
  background : @background;
  display : table-cell;
}

.info_line {
    border-bottom: solid;
    border-bottom-width: 1px;
    border-color: @border;
}

.locus_line {
  text-align: center;
}

.info_row {
    min-width: 100px;
    display: inline-block;
}

.locus_row {
  margin: 0 10px;
  display: inline-block;
  text-align: left;
}

.info_row_content {
    width: 100%;
    display: inline-block;
}

#info_data_file
{
  font-size: 200%;
}

						  /*Style polyline / graph*/

.background_graph{
  fill : @background
}

.background_graph2{
  fill : @background
}

.graph_line{
  stroke-width : 2.5px;
  cursor:pointer;
  stroke: @default;
}

.graph_data{
    fill: none;
    stroke-width: 8px;
    opacity: 0.3;
    cursor:pointer;
}

.graph_data:hover{
    opacity:0.8;
}

.graph_inactive{
  stroke-width : 1.5px;
  cursor:pointer;
  display:none;
}

.graph_select{
  stroke-width : 5px;
  cursor:pointer;
  stroke-dasharray : 20px,5px ;
  stroke: @default;
}

.graph_focus{
  stroke-width : 5px;
  cursor:pointer;
  stroke: @select;
}

.axis_m{
  stroke : @default ;
  opacity : 0.5 ;
  stroke-width : 20px;
}

.axis_m_other {
  stroke: @default ;
  opacity: 0.25 ;
  stroke-width: 10px;
  display: none;
}

.axis_h{
  stroke : @default ;
}

.axis_v{
 display: none;
}

.axis_v_hidden, .axis_h_hidden{
 display: none;
}

.axis_button, .axis_leg{
  fill : @default;
}

#resolution1{
  fill : @background;
  opacity : 1;
}

#resolution5{
    fill: @border;
    opacity: 0.6;
}

.graph_time{
  fill : @default ;
  text-anchor:middle;
  font-size : 100%;
}

.graph_time2{
  font-weight : bold;
  fill : @default ;
  text-anchor:middle;
  font-size : 120%;
}

.graph_text{
  font-weight : bold;
  fill : @default ;
  text-anchor:end;
  dominant-baseline: middle;
}

.graph_text2{
  font-weight : bold;
  fill : @default ;
}

.graph_time:hover{
  cursor:pointer;
  fill : @select;
}

.graph_menu{
  position: absolute;
  top: 0px;
  right: 0px;
  min-width: 22px;
  min-height: 18px;
  text-align: center;
  border-bottom: solid;
  border-left: solid;
  border-color: @border;
  background : @background;
}

.graph_list{
  display: none;
}

.graph_listElem:hover{
  background : @border;
  width: 100%;
  cursor: move;
  cursor: webkit-grab;
}


							  /*style scatterPlot element*/

.background_sp{
  fill : @background
}

.circle{
  cursor:pointer;
  -webkit-transition: fill 0.2s;
  -o-transition: fill  0.2s;
  -ms-transition: fill 0.2s;
  transition: fill 0.2s;
  fill : @default;
  stroke-width:4px;
}

.circle_inactive{
  cursor:pointer;
  opacity: 0.5
}

.circle_select{
  stroke-width : 2.5px;
  stroke : @select;
  cursor:pointer;
  fill : @default;
}

.circle_focus{
  cursor:pointer;
  fill : @select;
}

.circle_hidden{
  -webkit-transition: fill 0.2s;
  display:none;
}

.line_active {
  opacity: 1;
  stroke-width: 4px;
}

.line_inactive {
  display: none;
}

.sp_legend{
  fill : @default ;
  font-weight : bold;
  text-anchor : middle;
  dominant-baseline: middle;
}

.sp_legend2{
  fill : @default ;
  opacity : 0.4;
  text-anchor : middle;
  dominant-baseline: middle;
}

.sp_system{
  position:absolute;
  top: -0.5em;
}

.sp_system_label{
  color : @default ;
  height:0px;
  position:relative;
  -webkit-transition: left 0.5s;
  transition: left 0.5s;
}

.sp_system_label:hover{
  color : @select ;
  cursor: pointer;
}

.sp_rotated_legend{
  fill : @default ;
  font-weight : bold;
  text-anchor : left;
}

.sp_legend_focus{
  fill : @select;
  font-weight : bold;
  text-anchor : middle;
}

.sp_hidden_legend{
  display : none;
}

.sp_line , .sp_subline{
  stroke : @default ;
}

.sp_subline{
  stroke-width : 0.5px;
  stroke-dasharray: 6,6;
}

.sp_subline_hidden{
  stroke-width : 0px;
}

							  /*style list/data element*/


/*Metric*/

@top_container_height : 32px;
@width_left_container : 475px;
@width_highlight : 300px;
@width_stats: 350px;
@width_scrollbar : 30px;
@width_clusterBox :16px;
@width_starBox : 16px;
@width_thumbBox : 16px;
@width_sizeBox : 52px;
@width_infoBox : 20px;
@width_systemBox : 12px;
@width_listElem : (@width_left_container - @width_scrollbar);
@margin : 6px;
@margin_nameBox : 10px;

.list:hover, .tagElem:hover, .data:hover{
  background :@border;
}

#list, #data{
    border-top: solid;
    border-width: @margin;
    border-color : @border;
}

#list-row, #data-row{
  display: table-row;
}

#list, #data{
  display:table-cell;
}

#data-row{
  height : 0.1px;
}

#list_clones{
  overflow-y : scroll;
  overflow-x : hidden;
  height : calc(~"100% - 30px");  /*100% - list_menu height */
  padding:2px;
}

#list_data{
    display: block;
    border-width: 4px;
    border-color: @border;
    overflow-y: scroll;
}

.data_name{
  margin-left : 40px;
  width: 300px;
  margin-right : 10px;
  display : inline-block;
}

.data_value{
}

.data {
    padding-right: 30px;
}

.list{
  width : 	445px;
  display :	block;
  padding : 	2px;
}

.listElem{
  width : @width_listElem;
  font-size: 13px;
  cursor:pointer;
  -webkit-transition: color 0.2s;
  -o-transition: color  0.2s;
  -ms-transition: color 0.2s;
  transition: color 0.2s;
  padding: 1px 4px 4px 1px;
  height :14px;
}

.selected{
  color : @select;
}

.nameBox {
  width: 300px;
  margin-right: @margin_nameBox;
  overflow: hidden;
  display: inline-block;
  height: 16px;
  position: relative;
  float:left;
  white-space:nowrap;
}

.seq-fixed .nameBox {
  width: 250px;
}

.sizeBox, .mutationBox {
  width: @width_sizeBox;
  float: right;
  overflow: hidden;
  display: inline-block;
  height: 16px;
  position: relative;
}

.mutationBox {
  padding-right: 5px;
}

.starBox{
  width: @width_starBox;
  float: right;
  height: 16px;
  display: inline-block;
  user-select :none;
  overflow: hidden;
}


.thumbBox{
  width: @width_thumbBox;
  float: right;
  height: 16px;
  display: inline-block;
  user-select :none;
  overflow: hidden;
}

.infoBox{
  font-size: 90%;
  width: 16px;
  float: right;
  height: 15px;
  display: inline-block;
  user-select: none;
  text-align: center;
  border: solid;
  border-width: 1px;
  border-color: @background;
  border-radius: 5px;
  margin: 0px 1px;
}
.infoBox:hover{
  background: @highlight;
}
.infoBox-open{
  background: @border;
}

.systemBox, .systemBoxMenu {
    display: inline-block;
    width: @width_systemBox;
    height: @width_systemBox;
    line-height: @width_systemBox;
    vertical-align: middle;
    text-align: center;
    border-radius: 3px;
    border-width: 1px;
    margin: 2px 4px 4px 2px;
    color: #fff;
    color: rgba(255, 255, 255, 0.7);
    font-size: 70%;
    background: @border;
}

.systemBox {
    float: left;
}

.systemBoxNameMenu {
    display: inline-block;
    min-width: 60px;
    padding: 2px 2px 1px 2px;
    cursor : pointer;
}	      

.hiddenCheckBox {
    display : none;
}

.clusterBox{
  width: @width_clusterBox;
  float: left;
  height: 12px;
  display: inline-block;
  text-align :center
}

.delBox{
  height: 12px;
  width: 12px;
  display: inline-block;
  float: left;
  user-select: none;
  margin-right: 8px;
  margin-left: 2px;
}



#new_name{
  font-family: @monospace-font;
  font-weight:bold;
}

.list_sort{
    margin-right : 30px;
    float: right;
}

							  /*style segmenter element*/
.list_select{
  width : 445px;
  display : block;
  border : solid;
  border-width : 2px;
  padding : 0px;
  border-color : @select;
}
.list_focus{
    background : @border !important;
}

.sequence-line { 
    white-space: nowrap;
}
.sequence-line:hover { 
    font-weight: bold;
}

.seq-fixed {
  position: relative;
  display: inline-block;
  width: (@width_left_container - @width_scrollbar);
  margin: -2px;
  padding: 2px;
  padding-left: 5px;
  left:0px;
  cursor:pointer;
  z-index:1;
}

.seq-mobil {
  margin-left: @width_left_container;
  letter-spacing: 0.12em;
  font-family : @monospace-font; 
  position: relative;
  bottom: 3px;
  font-size:1em;
}

.seq-marge {
  word-spacing: normal;
}

.V {
  color: #000;
  background-color: #efe;
}
.D {
  color: #000;
  background-color: #fee;
}
.J {
  color: #000;
  background-color: #ffffe2;
}
.N, .N + .J, .N + .D {
  box-shadow: -1px 0 0 @default;
}

.highlight_border, .highlight_seq {
    display: inline-flex;
    height: 1em;
    position: relative;
}
.highlight_border {
    border-bottom: solid;
    margin: -1px;
    border-width: 4px;
    -khtml-user-select: none;
    -webkit-user-select: none;
    -moz-user-select: -moz-none;
    -ms-user-select: none;
    user-select: none;
    pointer-events: none;
    opacity: 0.3;
    bottom: 1px;
}
.highlight_seq {
  top: .9em;
  padding-bottom: 1px;
  opacity: 0.6;

  font-size: 70%;
  letter-spacing: .428em; /* (1-.7) / .7 */
  left: .214em;
}
.highlight{
    display: inline-block;
    width: 0px;
    word-spacing: normal;
}
span .substitution, span .indel {
  font-weight: bold;
  color: #800;
}
span .substitution {
  border-bottom: 1px solid #800;
}

							  /*tag*/

.tagSelector{
  padding: 5px;
  position: absolute;
  left: @width_left_container;
  top: 195px;
  width:220px;
  border:solid;
  display:none;
  background: @background;
}

.dataMenu{
  padding: 5px;
  position: absolute;
  left: @width_left_container;
  bottom: 195px;
  width:220px;
  border:solid;
  display:none;
    background: @background;
}

.tagElem{
  margin:1px;
  height: 20px;
}

.tagElem:hover{
  border-color : white;
  cursor : pointer;
  color : @select;
}

.tagColorBox {
  margin-right: 5px;
  height: 14px;
  width: 14px;
  display: inline-block;
  cursor:pointer;
  user-select :none;
  margin-bottom: -3px;
  margin-top: 3px;
}

#normalized_size {
    width: 80px;
}

							  /*menu*/

.menu{
  padding:3px;
  float:left;
  margin:5px;
  cursor:pointer;
  background:inherit;
}


.menu a {
  text-decoration: none;
  color: inherit ;
}

.submenu{
    width: 200px;
    display: inline-table;
}

.menu_box {
    margin: 0px;
    padding: 5px;
    border-top: solid;
    border-width: 1px;
    border-color:@border;
}

.submenu{
    width: 200px;
    display: inline-table;
}

.menu_box {
    margin: 0px;
    padding: 5px;
    border-top: solid;
    border-width: 1px;
    border-color:@border;
}

.div-menu-selector{
    float: right;
    margin: -2px 0px 0px 5px;
}

.menu-selector {
    background: @background;
    color: #657B83;
    height: 18px;
    width: 60px;
    -webkit-appearance: none;
    border: solid;
    border-width: 1px;
    border-radius: 2px;
}

#file_menu, #axis_choice{
  z-index:2;
  border:solid; 
  position: fixed; 
  top: 200px; 
  min-width:400px;
  margin-left:-250px;
  left :50%;
  font-size: 13px; 
  padding: 10px;
  background:@background;
  display:none; 
}

.buttonSelector {
  background : @background;
  cursor:pointer;
  font-size: 13px;
  margin :2px;
  display:block;
  text-align:left;
}

.systemBoxNameMenu:hover, .focus_selected:hover, .button:hover,.button_right:hover, .buttonSelector:hover, .button2:hover{
  background : @border;
  color : @select;
  cursor: pointer;
}


/*	//////////////////////////////////////////////////////////////	*/


.popup_container{
  z-index:20;
  border:solid; 
  position: fixed; 
  top: 250px; 
  left:50% ;
  width:500px;
  font-size: 13px; 
  padding: 10px;
  background: @background;
  display:none;
  left: -moz-calc(~"50% - 250px");
  left: -webkit-calc(~"50% - 250px");
  left: calc(~"50% - 250px");
}

/* Main style for <a> Used in particular in .popup_container, on login screen, in news, in links to results (for patient list and patient info)  */


a {
  color: @default;
}

a:hover {
  color: @select;
}
/* ----------------- */

.data-container, .info-container{
  z-index:3;
  border:solid; 
  position: fixed; 
  top: 50px; 
  left: 20px + @width_left_container;
  font-size: 13px; 
  padding: 10px;
  background: @background;
  display:none;
  max-width: -moz-calc(~"100%" - @width_left_container + 60px);
  max-width: -webkit-calc(~"100%" - @width_left_container + 60px);
  max-width: calc(~"100%" - @width_left_container + 60px);
  height: -moz-calc(~"100%" - 215px);
  height: -webkit-calc(~"100%" - 215px);
  height: calc(~"100%" - 215px);
}

.data-msg, .info-msg{
  overflow-x: hidden;
  height : 100%;
  width : 100%;
}

#file_menu, #menu, #list_clones, #tagSelector, #display-menu, #bot-container, .seq-fixed{
 background : @background;
}

.closeButton{
  position: absolute;
  top: 0px;
  right: 0px;
  border: solid;
  background: inherit;
  border-radius: 20px;
  width: 15px;
  height: 15px;
  text-align: center;
  font-weight: bolder;
  cursor: pointer;
  padding: 1px;
  font-size: 90%; 
  color: @border;
}

.closeButton:hover{
  color: @select;
}

.button, .button_right, .button_left{
  cursor:pointer;
  font-size: 13px;
  padding: 0px 3px;
  margin-right:5px;
  margin-left:5px;
  min-width : 16px;
  color: @default;
}

.button_next {
    margin-left: -8px ;
}

.button_right{
    float: right;
}

.button_left {
    float: left;
    margin-right: -27px;
}

.button2 {
    border: solid;
    border-width: 1px;
    padding: 3px;
    margin: 3px;
    display: inline-block;
    cursor: pointer;
    background: @border;
    width: auto;
    text-align: center;
    padding-left: 10px;
    padding-right: 10px;
}

.smallbutton {
    cursor:pointer;
    font-size: 13px;
    text-decoration:underline;
}

#logo
{
  font-size: 130%;
  font-weight: bold;
  opacity: 1;
  padding: 5px 20px ;
  cursor: pointer;
}

span.logo
{
  font-size: 60% ;
  font-weight: bold;
  vertical-align: super;
  opacity: .8;
  color: #f88;
}

.bot-bar {
    -khtml-user-select: none;
    -webkit-user-select: none;
    -moz-user-select: -moz-none;
    -ms-user-select: none;
    user-select: none;
    height: 20px;
    border-bottom: solid;
    width: 100%;
    padding-top: 2px;
}

.menu-segmenter {
    position: relative;
    float: left;
    width: @width_left_container +200;
}

#toIMGTSeg {
    width: 12px;
    display: inline-block;
    text-align: center;
}

.menu-highlight {
    position: relative;
    float: left;
    width: eval(@width_highlight);
}

.devel-mode, .beta-mode {
    display: none;
}

.focus {
    position: relative;
    text-align: center;
    float: left;
    width: -moz-calc(~"100%" - (@width_left_container + @width_stats + @width_highlight + 50));
    width: -webkit-calc(~"100%" - (@width_left_container + @width_stats + @width_highlight + 50));
    width: calc(~"100%" - (@width_left_container +  @width_stats + @width_highlight + 50));
    overflow: hidden;
    height: 1.1em;
}
.stats {
  position: relative;
  text-align: right;
  float: right;
  width: @width_stats - 3px;
  padding-right: 3px;
}

.segmenter {
    overflow-x: scroll !important; 
    overflow-y: auto;
    height : 100px;
}

.selector{
  display: none;
  position: fixed;
  margin-right: -5px;
  padding: 3px;
  border: solid;
  background: inherit;
  text-center: left;
  min-width: 150px;
  margin-left: -6px;
  border-top: none;
  margin-top: -moz-calc(@top_container_height - 24px);
  margin-top: -webkit-calc(@top_container_height - 24px);
  margin-top: calc(@top_container_height - 24px);
  z-index:5;
  overflow: hidden;
}

#bot-container {
  position: fixed;
  bottom: 0px;
  left: 0px;
  width: 100%;
  border-top: solid;
  border-width: 6px;
  min-height: 125px;
}

.tn{
  width:120px;
  display:inline-table;
}

#list_menu{
  -khtml-user-select: none;
  -webkit-user-select: none;
  -moz-user-select: -moz-none;
  -ms-user-select: none;
  user-select: none;
  border-bottom:solid;
  padding:2px;
  width: 100%;
  border-bottom-width: 2px;
}

#filter_input
{
  width: 200px;
}

.tagD{
  margin-left: 15px;
  width: 25px;
  display : inline-block;
  float : right;
}

.center{
  text-align: center;
}

.gradient{
  background: rgb(61,36,182); 
  background: -moz-linear-gradient(left, rgb(61,36,182) 0%, rgb(36,72,181) 10%, rgb(36,135,184) 20%, rgb(36,183,171) 30%, rgb(36,184,110) 40%, rgb(36,183,48) 50%, rgb(85,184,36) 60%, rgb(146,183,36) 70%, rgb(184,159,36) 80%, rgb(178,95,35) 90%, rgb(184,36,36) 100%); /* FF3.6+ */
  background: -webkit-gradient(linear, left top, right top, color-stop(0%,rgb(61,36,182)), color-stop(10%,rgb(36,72,181)), color-stop(20%,rgb(36,135,184)), color-stop(30%,rgb(36,183,171)), color-stop(40%,rgb(36,184,110)), color-stop(50%,rgb(36,183,48)), color-stop(60%,rgb(85,184,36)), color-stop(70%,rgb(146,183,36)), color-stop(80%,rgb(184,159,36)), color-stop(90%,rgb(178,95,35)), color-stop(100%,rgb(184,36,36))); /* Chrome,Safari4+ */
  background: -webkit-linear-gradient(left, rgb(61,36,182) 0%,rgb(36,72,181) 10%,rgb(36,135,184) 20%,rgb(36,183,171) 30%,rgb(36,184,110) 40%,rgb(36,183,48) 50%,rgb(85,184,36) 60%,rgb(146,183,36) 70%,rgb(184,159,36) 80%,rgb(178,95,35) 90%,rgb(184,36,36) 100%); /* Chrome10+,Safari5.1+ */
  background: -o-linear-gradient(left, rgb(61,36,182) 0%,rgb(36,72,181) 10%,rgb(36,135,184) 20%,rgb(36,183,171) 30%,rgb(36,184,110) 40%,rgb(36,183,48) 50%,rgb(85,184,36) 60%,rgb(146,183,36) 70%,rgb(184,159,36) 80%,rgb(178,95,35) 90%,rgb(184,36,36) 100%); /* Opera 11.10+ */
  background: -ms-linear-gradient(left, rgb(61,36,182) 0%,rgb(36,72,181) 10%,rgb(36,135,184) 20%,rgb(36,183,171) 30%,rgb(36,184,110) 40%,rgb(36,183,48) 50%,rgb(85,184,36) 60%,rgb(146,183,36) 70%,rgb(184,159,36) 80%,rgb(178,95,35) 90%,rgb(184,36,36) 100%); /* IE10+ */
  background: linear-gradient(to right, rgb(61,36,182) 0%,rgb(36,72,181) 10%,rgb(36,135,184) 20%,rgb(36,183,171) 30%,rgb(36,184,110) 40%,rgb(36,183,48) 50%,rgb(85,184,36) 60%,rgb(146,183,36) 70%,rgb(184,159,36) 80%,rgb(178,95,35) 90%,rgb(184,36,36) 100%); /* W3C */
  filter: "progid:DXImageTransform.Microsoft.gradient( startColorstr='#3d24b6', endColorstr='#b82424',GradientType=1 )"; /* IE6-9 */
  width :180px;
  height: 8px;
  margin-top: 4px;
  display: inline-block;
}

#fps{
  float: right;
  position: relative;
  margin: 5px ;
  height:0px;
  opacity:0.5;
}

#test_result{
  font-family : @monospace-font;
  font-weight: bold;
  position: absolute;
  width: 100%;
  top: 0px;
  height: 100%;
  background: rgba(0,0,0,0.5);
  padding: 25px;
  color: grey;
}

.selector, #list_menu, #top-container, .list_clones, .bot-bar, #bot-container, .popup_container, #file_menu, .tagSelector, .closeButton, #axis_choice
{
  border-color: @border; 
}

#info_window td{
  width : 300px;
  max-width : 300px;
  overflow-wrap: break-word;
  word-wrap: break-word;
  border-style:solid;
  border-color: @border;
  border-width :1px;
  text-align: center;
  vertical-align: middle;
}

#info_timepoint td{
  min-width : 150px;
  max-width : 700px;
  overflow-wrap: break-word;
  word-wrap: break-word;
  border-style:solid;
  border-color: @border;
  border-width :1px;
  vertical-align: middle;
}

#info_window table, #info_timepoint table{
  border-style:solid;
  border-color: @border;
  border-collapse: collapse;
}

#info_window table .header, #info_timepoint table .header{
  border-width : 2px;
  background-color: @border;
}

span.warning { color: orange; }
text.warning { fill: orange; }
span.alert { color: red; }
text.alert { fill: red; }

span.warningReads {
                  margin-left: .5em;
                  display:inline-block;
                  width: 1em;
                  text-align:center;
                  cursor: help}

.sp_menu_anchor{
    position: relative;
    top: 0px;
    left: 0px;
    width: 0px;
    height: 0px;
}

.sp_menu{
    min-width: 22px;
    min-height: 18px;
    border-bottom: solid;
    border-right: solid;
    border-color: @border;
    background : @background;
    display: inline-block;
    padding : 2px;
}

.sp_menu_content{
    padding: 0px;
    width: 0px; 
    height: 0px; 
    opacity: 0;
    font-size: 0%;
    overflow: hidden;
    transition-property: all;
    transition-duration: 0.2s;
}

.sp_menu:hover .sp_menu_content,
.sp_menu_content:focus {
    padding: 8px 0px 0px 0px;
    width: 180px; 
    height: 130px;
    font-size: 100%;
    opacity: 1;
}

.sp_menu_mode{
    display: flex;
}

.sp_menu_icon{
    width: 40px;
    padding: 2px 2px 0px 2px;
    border: solid;
    border-width: 2px;
    border-radius: 5px;
    margin: 5px auto;
    border-color : @background;
}

.sp_menu_icon:hover{
    background : @border;
}

.sp_selected_mode{
    border-color : @default;
}

.sp_menu_icon svg{
    fill: @default;
}

.sp_menu_icon svg:hover{
    fill: @highlight;
}

.sp_selector{
    fill: @select;
    stroke-width: 2px;
    stroke: @select;
    fill-opacity: 0.2;
}

.axis_select {
    display: flex;
    overflow: hidden;
    white-space: nowrap;
}

.axis_select select {
    background: @background;
    color: @default;
    height: 20px;
    width: 120px;
    -webkit-appearance: none;
    border: solid;
    border-width: 1px;
    border-radius: 2px;
    margin: 2px auto;
}

.axis_select_graph {
    top: 0px;
    display: none;
}

.axis_select select[selected=selected] {
   color: @select;
}

#visu-separator {
    height: @margin;
    cursor: move;
    cursor: -webkit-grab;
    background: @border;
}

#bot-separator {
    background: @border;
    width: 100%;
    height: @margin;
    cursor: pointer;
    position: relative;
    top: -@margin;
}

#vertical-separator {
    position: relative;
    float: left;
    height: 100%;
    width: @margin;
    line-height: calc(~"100% - 1px");
    background : @border;
    cursor: pointer;
}

#visu-separator:hover , #vertical-separator:hover, #bot-separator:hover {
    background: @highlight;
}

.edit_button {
    float: right;
    margin-right: 2px;
    cursor: pointer;
}

.db_div{
  z-index:5;
  position: fixed; 
  top: 35px;
  width:100%;
  height: calc(~"100% - 35px");
  font-size: 14px; 
  background: @background;
  display:none;
  left: 0%;
}

.db_msg{
    margin : 15px;
    height : calc(~"100% - 30px")
}

#db_content{
    height : calc(~"100% - 160px");
}

.db_table{
    width: 100%;
    border-collapse: collapse;
    table-layout: fixed;
}

.db_table td {
    .ellipsis;
}

.table_compare td:hover {
    .ellipsisOverflow;
}

.db_table_split{
    text-align:center;
    background-color: @highlight;
}

.db_table_split td {
    border-top: 2ex solid @background;
}

.db_table .column_200{    width: 200px;   }
.db_table .column_150{    width: 150px;   }
.db_table .column_100{    width: 100px;   }
.db_table .column_50{    width: 50px;   }

.db_table .column1{
    width: 100px;
}

.db_table .column2{
    width: 150px;
}

.db_table .column4{
    width: 50px;
}
.db_table .column5{
    width: 20px;
}

.db_table .column_sep {
    width: 50px;
    border: solid;
    border-width: 1px;
    border-color: @background;
    background: @background;
}

.db_block {
    width : 100%;
    display : inline-block;
}

.db_footer{
    display: inline-block;
    position: absolute;
    bottom: 5px;
    left:0px;
}

.db_block_left {
    float : left;
}

.db_block_right {
    float : right;
}

.db_table th{
    border-bottom: solid;
    border-color: @border;
    border-width: 1px;
} 

.db_table tr{
    border-bottom: solid;
    border-color: @border;
    border-width: 1px;
}

.pointer
{
    cursor: pointer;
} 

.db_table tr:hover{
    background: @border;
}

.db_table td{
    border-width:0px;
}

#db_header{
    height:20px;
}

#db_menu{
    float: left;
}

#db_auth{
    float: right;
}

#db_table_container{
    overflow-y: scroll;
    overflow-x: hidden;
    height: 100%;
    position: relative;
}

#db_fixed_header {
    position: absolute;
    top: 0px;
    background: @highlight;
}

.db_help_desc {
    margin-left: 150px;
}

.db_help_action {
    margin-left: 10px;
    font-weight: bold;
}

.db_help_p {
    margin-top: 20px;
    margin-left: 20px;
}

.summary_filename {
    width: 200px;
    display: inline-block;
    height: 1em;
    overflow: hidden;
    overflow-wrap: break-word;
    margin-right:5px;
}

.loading_gauge {
    height: 13px;
    width: 98px;
    display: inline-block;
    border: solid;
    border-width: 1px;
    margin: 0px 5px;
}

.loading_bar {
    height: 100%;
    width: 0%;
    background-color: @default;
    display: inline-block;
    transition: width 0.2s;
}

.loading_status{
    width: 100px;
    text-align: center;
    display: inline-block;
    margin: 0px 5px;
}

.loading_seq {
    height: 15px;
    width: 100px;
    background-image: -webkit-linear-gradient(-45deg, @border 25%, rgba(255, 154, 26, 0) 25%, rgba(255, 154, 26, 0) 50%, @border 50%, @border 75%, rgba(255, 154, 26, 0) 75%); 
    background-image: -moz-linear-gradient(-45deg, @border 25%, rgba(255, 154, 26, 0) 25%, rgba(255, 154, 26, 0) 50%, @border 50%, @border 75%, rgba(255, 154, 26, 0) 75%);
    background-image: -o-linear-gradient(-45deg, @border 25%, rgba(255, 154, 26, 0) 25%, rgba(255, 154, 26, 0) 50%, @border 50%, @border 75%, rgba(255, 154, 26, 0) 75%);
    background-image: linear-gradient(-45deg, @border 25%, rgba(255, 154, 26, 0) 25%, rgba(255, 154, 26, 0) 50%, @border 50%, @border 75%, rgba(255, 154, 26, 0) 75%);
    background-size: 50px 50px;
    -webkit-animation: move 2s linear infinite;
    -moz-animation: move 2s linear infinite;
    -o-animation: move 2s linear infinite;
    animation: move 2s linear infinite;
    display: inline-block;
    text-align:center;
    margin: 0px 5px;
}

@-webkit-keyframes move {
    to { background-position: 50px 50px; }
}

@-moz-keyframes move {
    to { background-position: 50px 50px; }
}

@-o-keyframes move {
    to { background-position: 50px 50px; }
}

@-webkit-keyframes move {
    to { background-position: 50px 50px; }
}

.flash_container {
    position : absolute;
    display : block;
    bottom : 0px;
    right : 0px;
    z-index: 100;
}

.log_container {
    height : 500px;
    width : 400px;
    position : absolute;
    display : block;
    bottom : 0px;
    right : 0px;
    padding: 5px;
    margin: 5px;
    background: @highlight;
    border-color: @border;
    z-index: 15;
    border: solid;
    border-width: 1px;
    opacity: 0.85;
    overflow-y: scroll;
    display: none;
}

.flash_0, .flash_1, .flash_2, .flash_3 {
    width: 350px;
    min-height: 20px;
    border: solid;
    border-width: 2px;
    display: block;
    border-radius: 5px;
    padding: 5px;
    margin: 5px;
    background: @background;
    border-color: @border;
    -webkit-transition: background 1s linear;
    -moz-transition: background 1s linear;
    -ms-transition: background 1s linear;
    -o-transition: background 1s linear;
    transition: background 1s linear;
}

.log_0, .log_1, .log_2, .log_3 {
    width: auto;
    min-height: 20px;
    display: block;
    margin: 5px;
    background: @background;
    border: solid;
    border-width: 2px;
    border-radius: 2px;
    border-color: @background;
}

.flash_1, .log_1 {
    font-weight: bold;
    background-color: @message_green1;
}

.flash_2, .log_2 {
    font-weight: bold;
    background-color: @message_green2;
}

.flash_3, .log_3 {
    font-weight: bold;
    border-color: darkred;
    background-color: @message_red;
}

select>option:hover {
    background-color: @border;
}

.inactive {
    opacity: 0.5;
}

.suggest_box {
    height: 0px;
    display: block;
    position: relative;
}

.suggest_list {
    border: solid;
    border-width: 1px;
    min-height: 20px;
    background: @background;
    border-color: @border;
    max-height: 100px;
    display: none;
    width: 300px;
    overflow-y: scroll;
}

.suggest_arrow {
    position : absolute;
    width : 12px;
    height : 16px;
    top : -22px;
    right : 0px;
    cursor : pointer;
    background: url("icon/arrow-down.png") 50% 50% no-repeat;
}

.suggestion {
    cursor : pointer;
}

.suggestion:hover {
    background : @highlight;
}

input:focus, textarea:focus {
    border-color: @border;
    -webkit-box-shadow: inset 0 1px 1px @background, 0 0 8px @border;
    -moz-box-shadow: inset 0 1px 1px @background, 0 0 8px @border;
    box-shadow: inset 0 1px 1px @background, 0 0 8px @border;
    outline: 0;
    outline: thin dotted \9;
}

pre,
code,
kbd,
samp,
tt{
  font-family:@monospace-font;
  font-size:1em;
}

table.log
{
  width: 90%;
}

table.log textarea
{
   width: 100%;
}

.log-ERROR {
  color: red;
}
.log-ADMIN {
  color: blue;
}

.loglink {
  color: purple;
  text-decoration: none;
}

.waiting_screen{
    background: rgba(0, 0, 0, 0.5);
    position: absolute;
    width: 100%;
    height: 100%;
    z-index: 1000;
    display: none;
}

.waiting_msg{
text-align: center;
font-size: 200%;
margin-top: 200px;
background: #FFF;
}

.console-div{
display:flex;
padding:5px 0px;
background:grey;
color:white;
font-family:@monospace-font;
white-space: pre-line;
overflow: auto;
max-height: 100%;
}

.console-flex{
flex-grow : 1;
}

.tagColor0{
    background : @tagColor0;
}
.tagColor1{
    background : @tagColor1;
}
.tagColor2{
    background : @tagColor2;
}
.tagColor3{
    background : @tagColor3;
}
.tagColor4{
    background : @tagColor4;
}
.tagColor5{
    background : @tagColor5;
}
.tagColor6{
    background : @tagColor6;
}
.tagColor7{
    background : @tagColor7;
}
.tagColor8{
    background : @default;
}
.inactiveTag{
    background-image : linear-gradient(45deg, transparent -25%, @background 100%, @background 100%, transparent 0%)
}

.message_container {
    display: none;
}

.message_container.header {
    overflow: hidden;
    text-align: center;
}

.urgent_message {
	border: 2px solid @message_border_red;
	margin: 3px;
	font-weight: bold;
        background-color: @message_red;
}

.info_message {
	border: 1px solid @border;
	margin: 4px;
        background-color: @message_green1;
}

.notification {
	padding: 3px;
	display: inline-block;
    -webkit-border-radius: 2px;
	-moz-border-radius: 2px;
	border-radius: 2px;
	cursor: pointer;
}

#login_messages .notification {
	display: block;
}

#login_messages .notification pre {
	padding: 3px;
	margin: 0px;
	display: block;
	width: auto;
}

#login_messages.message_container {
	width: 100%;
}

#listLocus, #listVsegment, #listDsegment, #listJsegment {
  display: none;
}

.db_block.info_block {
	height: 50%;
	overflow-y: scroll;
	overflow-x: hidden;
}

#db_table_container.info_table {
	height: 50%
}

.sample_details {
    float: left;
    width: 50%;
}

.reads_details {
    float: right;
    width: 50%;
}

.clear {
    clear: both;
}

.centered {
    text-align: center;

}

.info_container{
    color: @default;
    display: block;
    padding: 5px;
    border: 1px solid @border;
    overflow-wrap: break-word;
    overflow-y: hidden;
    max-width: 457px;
    min-height: @infoContainerHeight;
    max-height: @infoContainerHeight;
    width: 100%;
    background-color: @background;
}

.info_container:hover {
    max-height: 400px;
    z-index: 2;
}

.patient_info_text {
    margin-bottom: 5px;
}

textarea#edit_value {
    -webkit-box-sizing: border-box;
    -moz-box-sizing: border-box;
    box-sizing: border-box;
    //display:block;
    position: fixed;
    width: @width_left_container - 5px;
    min-height: 45px;
}

#top_info {
    display: inline-flex;
    font-weight: bold;
    color: black;
}

#top_info div {
    font-weight: normal;
    color: @default;
}

.save_info.button {
    vertical-align: top;
    padding-right: 0px;
    margin-right: 0px;
}

.vertical_space {
    margin-top: 5px;
    margin-bottom: 5px;
}

.inline-block_10 {
    display: inline-block;
    width: 10%;
    vertical-align: top;
}

.inline-block_90 {
    display: inline-block;
    width: 90%;
    vertical-align: top;
}

.ellipsis {
    white-space: nowrap;
    overflow: hidden;
    text-overflow: ellipsis;
}

/* Doesn't work well
 * if opacity is not at 1
 * (for instance with .inactive classes)
 */
.ellipsisOverflow {
   z-index: 999;
   position: relative;
   background: inherit;
   display: inline-block;
}

#highlightCheckboxes {
    height: 100%;
    float: left;
}

label.highlight_label {
    display: inline-block;
    height: 100%;
    vertical-align: bottom;
}

.disabledClass {
    pointer-events: none;
    opacity: 0.4;
}

.db_table td.pre-line {
    white-space: pre-line;
}