Merge branch 'feature-a/4775-fix-segfault-inexistent-germline' into 'dev'

core/germline.cpp: properly fail when no germlines have been loaded

Closes #4775

See merge request !959
42 jobs for dev in 92 minutes and 9 seconds (queued for 21 seconds)
Status Job ID Name Coverage
  Test Tools
passed #1123171
test_tools

00:00:11

failed #1118400
test_tools

00:00:02

 
  Test Quality
failed #1118402
allowed to fail
code_quality

00:00:02

passed #1118404
web
code_quality_custom

00:00:13

 
  Test Unit
passed #1118405
test_algo_unit

00:03:37

passed #1118407
web
test_browser_unit

00:01:05

passed #1118411
web
test_server_unit

00:00:18

 
  Test Functional
passed #1118427
web
chrome-browser-functional

00:06:46

passed #1118421
web
ff32-browser-functional

00:09:02

passed #1123217
x86_64 docker
ff32-server-functional

00:08:02

passed #1118425
web
ff45-browser-functional

00:07:34

passed #1118436
docker x86_64
ff45-server-functional

00:07:49

passed #1123187
legacy
old-chrome-browser-functional

00:07:08

passed #1118415
test_algo_should

00:13:12

failed #1118431
docker x86_64
ff32-server-functional

00:08:05

failed #1118429
legacy
old-chrome-browser-functional

00:06:55

 
  Test Tutorial
passed #1118441
web-pandoc
chrome-browser-tutorial

00:05:00

passed #1118439
web-pandoc
ff32-browser-tutorial

00:09:02

passed #1118440
web-pandoc
ff45-browser-tutorial

00:06:32

passed #1118442
legacy
old-chrome-browser-tutorial

00:03:40

 
  Test Tutorial Server
passed #1118443
web-pandoc
server_tutorial_server

00:09:24

 
  Test Shouldvdj
passed #1118444
test_algo_shouldvdj

00:28:51

 
  Test Functional External
passed #1118447
web
chrome-browser-functional-external

00:02:59

passed #1118445
web
ff32-browser-functional-external

00:03:13

passed #1118446
web
ff45-browser-functional-external

00:02:52

passed #1123369
legacy
old-chrome-browser-functional-external-chrome

00:02:16

failed #1118448
legacy
old-chrome-browser-functional-external-chrome

00:02:23

 
  Coverage
passed #1118449
algo_coverage

00:01:30

88.3%
 
  Valgrind Unit
passed #1118450
valgrind
algo_valgrind_unit

00:06:22

 
  Valgrind Functional
manual #1118451
valgrind allowed to fail manual
algo_valgrind_functional
 
  Multiple Tests
manual #1118463
cidocker allowed to fail manual
test_clang11_manual
manual #1118459
cidocker allowed to fail manual
test_clang34_manual
manual #1118460
cidocker allowed to fail manual
test_clang4_manual
manual #1118461
cidocker allowed to fail manual
test_clang6_manual
manual #1118462
cidocker allowed to fail manual
test_clang7_manual
manual #1118458
cidocker allowed to fail manual
test_gcc10_manual
manual #1118452
cidocker allowed to fail manual
test_gcc48_manual
manual #1118453
cidocker allowed to fail manual
test_gcc5_manual
manual #1118454
cidocker allowed to fail manual
test_gcc6_manual
manual #1118455
cidocker allowed to fail manual
test_gcc7_manual
manual #1118456
cidocker allowed to fail manual
test_gcc8_manual
manual #1118457
cidocker allowed to fail manual
test_gcc9_manual
 
Name Stage Failure
failed
code_quality Test Quality
make[1]: *** [LIL-L4.fastq.gz] Error 4
make[1]: Leaving directory '/home/gitlab-runner/builds/b8d876c1/0/vidjil/vidjil/demo'
Makefile:66: recipe for target 'demo' failed
make: *** [demo] Error 2
Uploading artifacts...
Runtime platform arch=386 os=linux pid=31245 revision=58272c27 version=12.7.0
WARNING: gl-code-quality-report.json: no matching files
ERROR: No files to upload
ERROR: Job failed: exit status 1