vidjil merge requestshttps://gitlab.inria.fr/vidjil/vidjil/-/merge_requests2016-12-18T22:15:31+01:00https://gitlab.inria.fr/vidjil/vidjil/-/merge_requests/1Fix “db is undefined” lorsque la base de données n'est pas utilisée2016-12-18T22:15:31+01:00Armand BourFix “db is undefined” lorsque la base de données n'est pas utiliséeDans le cas où l’utilisation de la base de données est désactivée dans le fichier de configuration, une exception lancée dans `segmenter.js` est remontée dans la console JavaScript, ce qui facilite le développement. Ce commit implémente ...Dans le cas où l’utilisation de la base de données est désactivée dans le fichier de configuration, une exception lancée dans `segmenter.js` est remontée dans la console JavaScript, ce qui facilite le développement. Ce commit implémente ce comportement (qui était donc absent) dans les fichiers :
* `builder.js` ;
* `graph.js` ;
* `list.js` ;
* `scatterPlot.js`.
Il permet également d’éviter une erreur JavaScript `this.db is undefined` si une erreur survient dans ces fichiers.https://gitlab.inria.fr/vidjil/vidjil/-/merge_requests/2js/model_loader.js show sample information2017-01-03T14:38:53+01:00Mikaël Salsonjs/model_loader.js show sample informationmodify model loader to show sample information when a local file is download, by @aurelBZH
@magiraud @RyanHerbmodify model loader to show sample information when a local file is download, by @aurelBZH
@magiraud @RyanHerbMikaël SalsonMikaël Salsonhttps://gitlab.inria.fr/vidjil/vidjil/-/merge_requests/3Feature/fix segmenter2017-01-13T21:01:06+01:00Mikaël SalsonFeature/fix segmenterAdd the possibility to fix the segmenter to avoid seeing it going up and down (#1978)
A feature by @aurelBZHAdd the possibility to fix the segmenter to avoid seeing it going up and down (#1978)
A feature by @aurelBZHMikaël SalsonMikaël Salsonhttps://gitlab.inria.fr/vidjil/vidjil/-/merge_requests/4Feature/species2017-01-30T21:59:59+01:00Mathieu GiraudFeature/speciesFix #1987.Fix #1987.Mikaël SalsonMikaël Salsonhttps://gitlab.inria.fr/vidjil/vidjil/-/merge_requests/5Standalone webpage to analyse a few clones2017-02-22T16:38:06+01:00Mikaël SalsonStandalone webpage to analyse a few clonesSee #1797, #2070 (thanks @tydax)
To be done:
* [x] #2067
* [x] Use config variable (and default value) for controller URL
* [x] Browser functional tests
cc @magiraud @RyanHerbSee #1797, #2070 (thanks @tydax)
To be done:
* [x] #2067
* [x] Use config variable (and default value) for controller URL
* [x] Browser functional tests
cc @magiraud @RyanHerbhttps://gitlab.inria.fr/vidjil/vidjil/-/merge_requests/7Replace innerHTML to a more efficient solution2017-02-21T13:24:38+01:00Mikaël SalsonReplace innerHTML to a more efficient solution`innerHTML = ''` is known to be dramatically slow. Replace it by a more efficient solution.
Also see #2127.`innerHTML = ''` is known to be dramatically slow. Replace it by a more efficient solution.
Also see #2127.https://gitlab.inria.fr/vidjil/vidjil/-/merge_requests/8See groups on index page2017-03-16T15:14:55+01:00Mikaël SalsonSee groups on index pageÀ vérifier/discuter :
* [ ] Faut-il afficher le créateur également ? Pour l'instant c'est oui.
* [ ] Il y a deux appels à `get_group_list` séparés. Y a-t-il moyen de n'en avoir qu'un seul ?
Fix #2150
cc @magiraudÀ vérifier/discuter :
* [ ] Faut-il afficher le créateur également ? Pour l'instant c'est oui.
* [ ] Il y a deux appels à `get_group_list` séparés. Y a-t-il moyen de n'en avoir qu'un seul ?
Fix #2150
cc @magiraudRyan HerbertRyan Herberthttps://gitlab.inria.fr/vidjil/vidjil/-/merge_requests/9Rewrite trimSequence in tools.cpp2017-03-07T13:44:00+01:00Mikaël SalsonRewrite trimSequence in tools.cppCloses #2217Closes #2217Algo 2017.03Mathieu GiraudMathieu Giraudhttps://gitlab.inria.fr/vidjil/vidjil/-/merge_requests/10New URL parameters, encoding 'clones' and 'plot' information2017-03-17T22:20:49+01:00Mathieu GiraudNew URL parameters, encoding 'clones' and 'plot' informationA great new feature by @aurelBZH : add an URL observer, with `clones` and `plot` keywords, to have more reproducible application states.
cc @RyanHerbA great new feature by @aurelBZH : add an URL observer, with `clones` and `plot` keywords, to have more reproducible application states.
cc @RyanHerbMikaël SalsonMikaël Salsonhttps://gitlab.inria.fr/vidjil/vidjil/-/merge_requests/11Test and deploy every client branch2017-03-23T12:28:57+01:00Mikaël SalsonTest and deploy every client branchFixes vdj#370Fixes vdj#370Mathieu GiraudMathieu Giraudhttps://gitlab.inria.fr/vidjil/vidjil/-/merge_requests/12Catch more errors when launching process2017-05-10T07:03:24+02:00Mikaël SalsonCatch more errors when launching processcc @magiraudcc @magiraudRyan HerbertRyan Herberthttps://gitlab.inria.fr/vidjil/vidjil/-/merge_requests/13better clustering experience, updated .csv export2017-04-10T11:25:50+02:00Mathieu Giraudbetter clustering experience, updated .csv export#2326 #2327 #2335 #2326 #2327 #2335 Mikaël SalsonMikaël Salsonhttps://gitlab.inria.fr/vidjil/vidjil/-/merge_requests/15Voir le nom d'origine des clones2017-06-15T12:57:05+02:00Ghost UserVoir le nom d'origine des clonesFix #903
cc @magiraud @mikael-s @RyanHerbFix #903
cc @magiraud @mikael-s @RyanHerbhttps://gitlab.inria.fr/vidjil/vidjil/-/merge_requests/16test/_multilocus.rb correction2017-04-10T14:30:09+02:00Ghost Usertest/_multilocus.rb correctionA little fix in functional tests.
See #2347
cc @magiraud @mikael-s @RyanHerbA little fix in functional tests.
See #2347
cc @magiraud @mikael-s @RyanHerbhttps://gitlab.inria.fr/vidjil/vidjil/-/merge_requests/17Renamed clones selection2017-04-10T16:24:43+02:00Ghost UserRenamed clones selectionFix #2342
.focusout wasn't triggered when pressing 'enter', but needed to put old_event backFix #2342
.focusout wasn't triggered when pressing 'enter', but needed to put old_event backhttps://gitlab.inria.fr/vidjil/vidjil/-/merge_requests/18show/hide allele names2017-04-11T06:37:33+02:00Mathieu Giraudshow/hide allele namesSee #1679See #1679https://gitlab.inria.fr/vidjil/vidjil/-/merge_requests/19Refactor axes2017-04-14T21:09:48+02:00Mathieu GiraudRefactor axesGreat refactoring by @RyanHerb, axes are now flexible objects.
See #1471.Great refactoring by @RyanHerb, axes are now flexible objects.
See #1471.https://gitlab.inria.fr/vidjil/vidjil/-/merge_requests/20Feature s/tmp files2017-04-14T18:18:41+02:00Ryan HerbertFeature s/tmp filesAdds the possibility for users to download files output by programs run in Vidjil.
Fixes #2141Adds the possibility for users to download files output by programs run in Vidjil.
Fixes #2141https://gitlab.inria.fr/vidjil/vidjil/-/merge_requests/21remove some duplicates between list.js and segmenter.js2017-04-28T12:57:38+02:00Mathieu Giraudremove some duplicates between list.js and segmenter.jsVoir #1763.Voir #1763.https://gitlab.inria.fr/vidjil/vidjil/-/merge_requests/22Flexible axis display2017-06-15T13:13:03+02:00Ghost UserFlexible axis displayFeature ready, put in dev mode, just a few details to be completed in the future (#2407).
Fixes #2175, #2398, #2395Feature ready, put in dev mode, just a few details to be completed in the future (#2407).
Fixes #2175, #2398, #2395