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Script de déploiement / packages utilisés
#1025
· opened
Nov 29, 2016
by
Vidjil Team
old_tracker
!-important
priority-2
server
server-hosting
CLOSED
1
updated
Nov 22, 2017
Récupérer des données par FTP/HTTP/NFS ou autre
#1588
· opened
Nov 29, 2016
by
Vidjil Team
Web 2017.03
!-reflexion
LIL-Lille
priority-2
server
server-database
server-hosting
server-integration
server-mounted-files
CLOSED
7
updated
Nov 22, 2017
Séparation serveurs : app (html/js) // vda
#1448
· opened
Nov 29, 2016
by
Vidjil Team
!-reflexion
priority-1-low
server
server-hosting
server-upload
CLOSED (MOVED)
0
updated
Nov 22, 2017
Upload et 'Could not connect to database'
#1447
· opened
Nov 29, 2016
by
Vidjil Team
old_tracker
!-hard
!-reflexion
priority-2
server-hosting
server-speed
server-upload
CLOSED
0
updated
Nov 22, 2017
Expiration des fichiers .fasta
#1098
· opened
Nov 29, 2016
by
Vidjil Team
old_tracker
!-reflexion
priority-1-low
server-hosting
server-smtp
CLOSED
0
updated
Nov 22, 2017
Empêcher l'upload ou de lancer des jobs lorsqu'il ne reste plus assez d'espace disque
#2007
· opened
Nov 29, 2016
by
Vidjil Team
old_tracker
dev-robust
priority-3-month
server
server-hosting
CLOSED
1
updated
Jan 08, 2020
Supervision externe du serveur de prod / tests fonctionnels live
#1662
· opened
Nov 29, 2016
by
Vidjil Team
old_tracker
dev-tests
dev-tests-watir
priority-3-month
server-hosting
CLOSED
1
updated
Nov 22, 2017
Récupérer des données par FTP/HTTP ou autre
#1475
· opened
Nov 29, 2016
by
Vidjil Team
priority-1-low
server
server-hosting
server-integration
server-upload
CLOSED
1
updated
Nov 22, 2017
Mise à jour des checkboxes dans le menu settings
#2402
· opened
May 03, 2017
by
Téo Vasseur
Web 2017.05
!!-bug
client
client-ergonomy
client-menu
CLOSED
1
0
updated
Nov 22, 2017
Sélection de clones renommés impossible dans la liste
#2342
· opened
Apr 06, 2017
by
Téo Vasseur
!!-bug
*-go
+-deploy
client
client-cloneList
client-ergonomy
client-keyboard
CLOSED
1
9
updated
Nov 22, 2017
Sablier / indicateur s'active lors de l'upload
#1961
· opened
Nov 29, 2016
by
Vidjil Team
!!-bug
client-ergonomy
priority-2
CLOSED
1
updated
Nov 22, 2017
La barre légère du "compare two samples" ne se voit plus dans le graphe
#2874
· opened
Nov 22, 2017
by
Mathieu Giraud
!!-bug
client-graph
client-grid
user-request
CLOSED
2
updated
May 31, 2018
Exporter l'alignement
#2876
· opened
Nov 22, 2017
by
Mathieu Giraud
*-go
LIL-Lille
Paris-Pitié
client-aligner
client-export
cpp-dynprog
CLOSED
1
10
updated
Feb 28, 2019
Création batch de plusieurs patients/runs/sets
#2878
· opened
Nov 22, 2017
by
Mathieu Giraud
Paris-Pitié
server
server-sample-sets
user-request
CLOSED
15
updated
Oct 21, 2020
Tester le tutorial + CI
#2880
· opened
Nov 23, 2017
by
Mathieu Giraud
dev-ci
dev-tests
dev-tests-watir
doc
doc-tutorial
CLOSED
1
8
updated
Feb 11, 2021
Tests fonctionnels sur un serveur
#2881
· opened
Nov 23, 2017
by
Mathieu Giraud
!-important
#-quality
dev-ci
dev-tests
dev-tests-watir
server-docker
server-fuse
server-upload
CLOSED
12
updated
Aug 30, 2018
Get support avec Outlook : mauvais placement du sujet
#2882
· opened
Nov 23, 2017
by
Tatiana Rocher
CLOSED
1
0
updated
Feb 16, 2018
Bypass your cache
#2889
· opened
Nov 23, 2017
by
Mathieu Giraud
com
com-mail-template
doc
wont-fix
CLOSED
9
updated
Feb 11, 2020
Doit-on cacher ou inactiver les boutons cliqués dans l'interface ?
#2894
· opened
Nov 24, 2017
by
Ryan Herbert
client-ergonomy
server
CLOSED
12
updated
Sep 24, 2018
Autocomplétion patient/run/set
#2895
· opened
Nov 24, 2017
by
Mathieu Giraud
client
client-autocomplete
CLOSED
1
updated
Jan 30, 2018
Upload d'un sample : choix de n sample sets
#2896
· opened
Nov 24, 2017
by
Mathieu Giraud
client
client-autocomplete
client-ergonomy
server-sample-sets
CLOSED
1
0
updated
Mar 21, 2018
Tests unitaires clients : tous les tests ne sont pas lancés via Nightmare
#2899
· opened
Nov 24, 2017
by
Mikaël Salson
!!-bug
dev-ci
dev-tests
CLOSED
1
8
updated
Nov 28, 2017
Gitlab CI algo sur plusieurs slaves
#2900
· opened
Sep 06, 2017
by
Mathieu Giraud
Algo 2019.05
!-important
*-go
cpp
dev-ci
CLOSED
11
updated
May 20, 2020
Les histogrammes sur des valeurs numériques devraient avoir des légendes régulières
#2905
· opened
Nov 28, 2017
by
Mathieu Giraud
!!-bug
!-important
*-go
client
client-axis
CLOSED
1
8
updated
Aug 14, 2018
Clone manqué avec une grosse délétion (read trop court pour la fenêtre)
#2910
· opened
Nov 29, 2017
by
Anne de Septenville
Algo 2017.11
!-important
+-deploy
Paris-Pitié
bio-analyze-more
cpp
cpp-heuristic
CLOSED
8
updated
Jan 26, 2021
La config pourrait s'afficher dans le graph dans compare samples
#2911
· opened
Nov 29, 2017
by
Mathieu Giraud
client-graph
CLOSED
1
updated
Nov 29, 2017
Diminuer ou décaler dynamiquement, par seuil, la taille de la fenêtre
#2913
· opened
Nov 29, 2017
by
Mikaël Salson
Algo 2017.11
!-important
!-reflexion
bio-analyze-more
cpp
cpp-heuristic
CLOSED
1
2
updated
Apr 15, 2020
Sortir des champs `warn` dans le C++
#2916
· opened
Nov 29, 2017
by
Mathieu Giraud
Algo 2017.11
*-go
bio-control
cpp
cpp-export
CLOSED
4
updated
Jan 27, 2018
Afficher dans le client les `warn`provenant du .vidjil
#2917
· opened
Nov 29, 2017
by
Mathieu Giraud
*-go
bio-control
client
CLOSED
1
0
updated
Feb 16, 2018
TEST_TAP_EQUAL pour les tests unitaires
#2919
· opened
Nov 30, 2017
by
Mathieu Giraud
*-go
cpp
dev-tests
priority-1-low
CLOSED
0
updated
Jan 17, 2018
Documenter germline/homo-sapiens.g et les méthodes de recombinaison
#2920
· opened
Nov 30, 2017
by
Mathieu Giraud
com-paper
cpp
cpp-heuristic
doc
repseq-formats
CLOSED
1
updated
Sep 22, 2020
JS : `==` ou `===` en comparant par rapport à `undefined` ou `0`
#2921
· opened
Nov 30, 2017
by
Mikaël Salson
dev-policy
CLOSED
2
updated
Apr 10, 2018
Savoir sur quel serveur on est loggué
#2927
· opened
Dec 04, 2017
by
Mathieu Giraud
prod-server-lil
client-database
server-auth
server-hosting
CLOSED
1
2
updated
Nov 19, 2020
Avoir l'abondance des clones dans les résultats de la CloneDB
#2929
· opened
Dec 04, 2017
by
Mikaël Salson
*-go
LIL-Lille
app-clonedb
feature
CLOSED
1
2
updated
Jul 26, 2018
Voir les tags des sets résultats de CloneDB
#2933
· opened
Dec 04, 2017
by
Mathieu Giraud
app-clonedb
client-tags
CLOSED
1
1
updated
Sep 26, 2018
Taille de fenêtre en IGH : cas où 50 ne suffit pas ?
#1266
· opened
Nov 29, 2016
by
Vidjil Team
old_tracker
!-reflexion
bio-germlines
cpp-heuristic
priority-2
CLOSED
1
updated
Nov 20, 2018
Raisons de non-segmentation : remettre à plat, documenter ?
#1273
· opened
Nov 29, 2016
by
Vidjil Team
old_tracker
!!-bug
!-reflexion
cpp-heuristic
priority-1-low
CLOSED
0
updated
Nov 21, 2019
Le calcul de la e-valeur devrait prendre en compte le -t
#1604
· opened
Nov 29, 2016
by
Vidjil Team
bio-e-value
cpp-heuristic
priority-1-low
wont-fix
CLOSED
1
updated
Apr 10, 2018
Recombinaisons TRDD/TRAJ
#1586
· opened
Nov 29, 2016
by
Vidjil Team
old_tracker
*-go
bio-germlines
cpp-heuristic
priority-5-today
CLOSED
0
updated
Dec 04, 2017
Translocations, régions aval/amont
#1492
· opened
Nov 29, 2016
by
Vidjil Team
old_tracker
bio-germlines-pseudo
priority-2
CLOSED
1
updated
Apr 10, 2018
germlines.data et offline
#1237
· opened
Nov 29, 2016
by
Vidjil Team
old_tracker
bio-germlines
client
client-offline
priority-5-today
CLOSED
0
updated
Dec 04, 2017
Jenkins : relancer Vidjil-data si changement dans le git dans germline/
#1234
· opened
Nov 29, 2016
by
Vidjil Team
old_tracker
bio-germlines
dev-ci
wont-fix
CLOSED
1
updated
Aug 27, 2020
Branche improve_representative
#1998
· opened
Nov 29, 2016
by
Vidjil Team
old_tracker
priority-4-week
CLOSED
0
updated
Dec 04, 2017
C++11 ?
#1344
· opened
Nov 29, 2016
by
Vidjil Team
old_tracker
!-reflexion
cpp
priority-4-week
CLOSED
0
updated
Jan 11, 2021
FineSegmenter : refuser de segmenter si cela n'est pas joli
#1230
· opened
Nov 29, 2016
by
Vidjil Team
old_tracker
cpp-dynprog
cpp-finesegmenter
priority-4-week
CLOSED
0
updated
Dec 04, 2017
Utiliser pour de vrai les séquences upstream/downstream
#1549
· opened
Nov 29, 2016
by
Vidjil Team
old_tracker
*-go
REN-Rennes
bio-analyze-more
bio-germlines
cpp-heuristic
priority-3-month
CLOSED
0
updated
Dec 04, 2017
stats : segmenté ou avec window ?
#1517
· opened
Nov 29, 2016
by
Vidjil Team
old_tracker
*-go
bio-control
cpp
priority-3-month
CLOSED
0
updated
Dec 04, 2017
germlines.data: l'utiliser dans le browser
#1235
· opened
Nov 29, 2016
by
Vidjil Team
old_tracker
*-go
bio-germlines
client
priority-3-month
CLOSED
0
updated
Dec 04, 2017
Changer le germline d'un clone
#1553
· opened
Nov 29, 2016
by
Vidjil Team
old_tracker
!-reflexion
client-ergonomy
priority-3-month
CLOSED
0
updated
Dec 04, 2017
germlines.js: mise à jour des séquences
#1236
· opened
Nov 29, 2016
by
Vidjil Team
old_tracker
!-reflexion
bio-germlines
priority-3-month
CLOSED
0
updated
Dec 04, 2017
germline/germlines.data: trouver un format utile, l'utiliser un peu partout
#1012
· opened
Nov 29, 2016
by
Vidjil Team
old_tracker
!-hard
bio-germlines
cpp
priority-1-low
repseq-standardization
CLOSED
0
updated
Dec 04, 2017
Segmenter: pouvoir mettre les V et J germline dedans...
#1925
· opened
Nov 29, 2016
by
Vidjil Team
Web 2017.09
bio-CLL
client
client-aligner
feature
priority-3-month
CLOSED
8
updated
Feb 13, 2019
TRB incomplet
#1634
· opened
Nov 29, 2016
by
Vidjil Team
old_tracker
bio-analyze-more
bio-germlines
priority-3-month
CLOSED
0
updated
Dec 04, 2017
Germline 'xxx': on aimerait aussi avoir le FineSegmenter
#1605
· opened
Nov 29, 2016
by
Vidjil Team
old_tracker
bio-germlines
bio-germlines-pseudo
cpp
cpp-finesegmenter
priority-3-month
CLOSED
0
updated
Dec 04, 2017
Permettre de ne lancer que certains germlines d'un fichier .germlines
#2134
· opened
Jan 26, 2017
by
Mikaël Salson
Algo 2017.03
+-working
bio-germlines
cpp
cpp-options
feature
CLOSED
4
updated
Dec 04, 2017
Germlines de souris et de rat
#2133
· opened
Jan 26, 2017
by
Mathieu Giraud
Algo 2017.03
bio-germlines
bio-species
CLOSED
7
updated
Dec 04, 2017
Mettre à jour les germlines depuis IMGT
#1766
· opened
Nov 29, 2016
by
Vidjil Team
Algo 2017.03
Jan 16, 2017
bio-germlines
bio-species
dev-tests
priority-2
repseq-IMGT
CLOSED
1
updated
Mar 14, 2018
Classes des Ig en RNA-Seq
#1687
· opened
Nov 29, 2016
by
Vidjil Team
old_tracker
LYON-Sarah
bio-analyze-more
bio-immuno
cpp
cpp-heuristic
feature
priority-2
CLOSED
0
updated
Dec 04, 2017
Valeur de -m par défaut pas très claire
#1673
· opened
Nov 29, 2016
by
Vidjil Team
Algo 2017.07
bio-germlines
cpp
cpp-heuristic
cpp-options
priority-2
CLOSED
2
updated
Dec 04, 2017
vidjil.cpp: CMD_GERMLINES: permettre de spécifier les germlines depuis la ligne de commande (et de tous les prendre si besoin)
#1006
· opened
Nov 29, 2016
by
Vidjil Team
old_tracker
bio-germlines
cpp
priority-2
CLOSED
0
updated
Dec 04, 2017
Automatiser création pseudo-germlines, en particulier Dd2-Dd3, get-germline incomplet
#973
· opened
Nov 29, 2016
by
Vidjil Team
old_tracker
bio-germlines
priority-1-low
CLOSED
0
updated
Dec 04, 2017
Savoir sur quel sha1 ont été construits les paquets Debian et le dock
#2939
· opened
Dec 06, 2017
by
Mathieu Giraud
dev-cd
dev-ci
dev-gitlab
dev-packaging
server-docker
CLOSED
1
4
updated
Nov 26, 2019
Construire un paquet Docker sur une feature-.*s.*
#2940
· opened
Dec 07, 2017
by
Mathieu Giraud
!-important
*-go
dev-ci
dev-gitlab
server-docker
CLOSED
2
updated
Nov 20, 2018
Bug lors de la génération de rapport
#2942
· opened
Dec 08, 2017
by
Mikaël Salson
!!-bug
!-important
*-go
LIL-Lille
PAR-Debré
Paris - St Louis
client-export
client-rapport
priority-4-week
CLOSED
12
updated
Mar 05, 2018
Conserver le chemin précédent lors du chargement d'un fichier 'network'
#2948
· opened
Dec 11, 2017
by
Ryan Herbert
*-go
LIL-Lille
client
client-ergonomy
server-mounted-files
user-request
CLOSED
1
4
updated
Mar 21, 2018
Rewrite nginx pour les URL débrayable
#2949
· opened
Dec 12, 2017
by
Mathieu Giraud
*-go
client-api
CLOSED
2
7
updated
Dec 02, 2020
Tester l'installation via Docker sur une machine personnelle
#2950
· opened
Dec 13, 2017
by
Mathieu Giraud
doc
server-docker
CLOSED
2
updated
Oct 16, 2018
Admin / My Account : controleur et vue pour connaître son nombre d'échantillons/patients/runs/sets
#2951
· opened
Dec 13, 2017
by
Mathieu Giraud
#-vidjilnet
server
server-auth
server-my-account
CLOSED
1
2
updated
Nov 18, 2020
My Account: informations sur les groupes
#2952
· opened
Dec 13, 2017
by
Mathieu Giraud
LIL-Lille
server
server-auth
server-my-account
user-request
user-traceability
CLOSED
1
1
updated
Nov 18, 2020
Mettre à jour la documentation Docker
#2954
· opened
Dec 13, 2017
by
Mathieu Giraud
doc
server-docker
CLOSED
1
updated
Oct 16, 2018
Mettre dans le mail "request analysis" quelque chose pour qu'on retrouve de qui il s'agit
#2960
· opened
Dec 19, 2017
by
Mathieu Giraud
*-go
CLOSED
1
0
updated
Feb 16, 2018
Choix du dernier set/run lors de l'import d'un nouvel échantillon
#2961
· opened
Dec 20, 2017
by
Anne de Septenville
Paris-Pitié
client-autocomplete
feature
server
server-sample-sets
CLOSED
5
updated
Dec 20, 2017
Auto-complétion au clic avec les derniers set modifiés
#2963
· opened
Dec 20, 2017
by
Mikaël Salson
Paris-Pitié
client-autocomplete
feature
server
server-sample-sets
user-request
CLOSED
1
2
updated
Mar 21, 2018
Séquence non analysée avec la présence du gène constant
#2964
· opened
Dec 20, 2017
by
Anne de Septenville
Algo -- Important
!!-bug
!-reflexion
bio-analyze-more
bio-rnaseq
cpp
cpp-heuristic
CLOSED
12
updated
Feb 13, 2020
Autocomplétion patient/run/set : pointer sur :hover de la croix
#2976
· opened
Jan 16, 2018
by
Mathieu Giraud
client-autocomplete
client-ergonomy
CLOSED
1
0
updated
Mar 21, 2018
Autocomplétion patient/run/set : mettre une classe CSS différente dans le menu
#2977
· opened
Jan 16, 2018
by
Mathieu Giraud
client-autocomplete
CLOSED
1
0
updated
Mar 21, 2018
Rendre visible le numéro de sample set aux utilisateurs
2 of 2 tasks completed
#2978
· opened
Jan 16, 2018
by
Mathieu Giraud
com-mail-template
support-policy
CLOSED
1
1
updated
Mar 21, 2018
Autocomplétion patient/run/set : texte à afficher dans le span
#2979
· opened
Jan 16, 2018
by
Mathieu Giraud
bikeshedding
client-autocomplete
CLOSED
1
0
updated
Mar 21, 2018
Autocomplétion patient/run/set : utiliser la classe CSS du menu
#2981
· opened
Jan 16, 2018
by
Mathieu Giraud
bikeshedding
client-autocomplete
CLOSED
1
updated
Jan 30, 2018
Shorter / shifted w: documenter (algo.org, user.org)
#2982
· opened
Jan 16, 2018
by
Mathieu Giraud
Algo 2017.11
doc
CLOSED
2
updated
Jan 31, 2018
Shorter / shifted w: Refaire passer les tests
#2983
· opened
Jan 16, 2018
by
Mathieu Giraud
Algo 2017.11
dev-tests
CLOSED
2
updated
Jan 16, 2018
Le paramètre patient fonctionne-t-il toujours dans l'URL ?
#2988
· opened
Jan 17, 2018
by
Mikaël Salson
!!-bug
#-quality
client-api
server-sample-sets
CLOSED
1
updated
Feb 23, 2018
Réécrire les tests unitaires avec TEST_TAP_EQUAL
#2989
· opened
Jan 17, 2018
by
Mathieu Giraud
Algo 2017.11
*-go
cpp
dev-tests
priority-1-low
CLOSED
1
updated
Jan 30, 2018
'align' doit être robuste en cas de réponse mal formée du serveur
#2991
· opened
Jan 18, 2018
by
Mathieu Giraud
*-go
client
client-aligner
dev-robust
server-cgi
CLOSED
3
updated
Mar 06, 2018
'align' doit être robuste en cas de non-réponse du serveur
#2992
· opened
Jan 18, 2018
by
Mathieu Giraud
*-go
client
client-aligner
dev-robust
server-cgi
CLOSED
3
updated
Jan 18, 2018
Pas d'avertissement lorsque la date rentrée pour un sample est incorrecte
#2997
· opened
Jan 18, 2018
by
Mikaël Salson
Web 2018.01
!!-bug
LIL-Lille
client-ergonomy
server
server-sample-sets
CLOSED
1
2
updated
Mar 21, 2018
Le spinner tourne parfois alors qu'il ne se passe rien
#2998
· opened
Jan 18, 2018
by
Mikaël Salson
Web 2018.03
!!-bug
client
client-ergonomy
CLOSED
2
updated
Feb 15, 2019
Release 2018.01 -> 2018.02
#2999
· opened
Jan 18, 2018
by
Mathieu Giraud
Algo 2017.11
+-working
dev-build
CLOSED
14
updated
Apr 05, 2018
Rajouter "real info" pour les permissions par défaut lors de la création des utilisateurs
#3001
· opened
Jan 19, 2018
by
Mathieu Giraud
*-go
server
server-auth
server-groups
server-permissions
support-policy
CLOSED
1
3
updated
Dec 28, 2020
Releases algo via Gitlab CI
#3002
· opened
Jan 21, 2018
by
Mathieu Giraud
Algo 2018.08
dev-build
dev-ci
dev-gitlab
CLOSED
1
0
updated
Feb 12, 2019
Makefile et Makefile.algo, séquence de make
#3003
· opened
Jan 21, 2018
by
Mathieu Giraud
Algo 2017.11
dev-build
doc
CLOSED
6
updated
Feb 01, 2018
Passer la doc en markdown
1 of 2 tasks completed
#3004
· opened
Jan 21, 2018
by
Mathieu Giraud
Algo 2018.08
doc
CLOSED
1
6
updated
Sep 07, 2018
Génération doc html
#3005
· opened
Jan 21, 2018
by
Mathieu Giraud
Algo 2018.08
doc
CLOSED
5
updated
Jul 10, 2018
Création batch de sets: afficher un retour "run créé"
#3006
· opened
Jan 23, 2018
by
Mathieu Giraud
CLOSED
1
0
updated
Mar 21, 2018
Mettre les séquences downstream des J dans les germlines ?
#3008
· opened
Jan 24, 2018
by
Mikaël Salson
Algo 2018.08
!!-bug
PAR-Debré
app-analyze
bio-AA
bio-germlines
client-aligner
cpp
CLOSED
8
updated
Jul 24, 2018
Les séquences upstream ou downstream sont parfois trop courtes : récupérer les positions dans le génome, coller up/down
#3009
· opened
Jan 24, 2018
by
Mikaël Salson
Algo 2018.08
!!-bug
!-important
*-go
PAR-Debré
bio-germlines
cpp
CLOSED
1
19
updated
Sep 01, 2018
Vérifier que les codes/champs `warn` du C++ sont compatibles avec la liste souhaitée dans le futur
#3010
· opened
Jan 27, 2018
by
Mathieu Giraud
Algo 2017.11
bikeshedding
bio-control
CLOSED
0
updated
Jun 22, 2018
Short / shifted window : re-rendre cohérent le message sur stdout
#3011
· opened
Jan 27, 2018
by
Mathieu Giraud
Algo 2017.11
bikeshedding
cpp
doc
CLOSED
4
updated
Jan 29, 2018
Fichiers qui trainent dans la release
#3012
· opened
Jan 30, 2018
by
Mathieu Giraud
Algo 2017.11
CLOSED
4
updated
Jan 31, 2018
Warnings compilation sur Jenkins et ailleurs
#3013
· opened
Jan 30, 2018
by
Mathieu Giraud
Algo 2017.11
cpp-compiler
CLOSED
7
updated
Jan 30, 2018
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