Issues · vidjil / vidjil

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Browser

#1884 · opened Nov 29, 2016 by Vidjil Team old_tracker cpp priority-5-today repseq-formats sub
- CLOSED
- 0
updated Nov 29, 2016
doc/analysis-format.org

#1885 · opened Nov 29, 2016 by Vidjil Team old_tracker cpp priority-5-today repseq-formats sub
- CLOSED
- 0
updated Nov 29, 2016
Browser: faire que cela marche avec .vidjil d'avant

#1886 · opened Nov 29, 2016 by Vidjil Team old_tracker cpp priority-5-today repseq-formats sub
- CLOSED
- 0
updated Nov 29, 2016
Warning n'apparaît pas dans le segmenter

#1888 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug client-aligner priority-3-month
- CLOSED
- 0
updated Nov 29, 2016
Après merge des séquences, les séquences ne sont plus clickables/comparables

#1891 · opened Nov 29, 2016 by Vidjil Team old_tracker BRU-Bruxelles client-aligner client-cloneList com-vw-vidjil-workshop priority-3-month
- CLOSED
- 1
- 1
updated Apr 18, 2018
Ellipsis à faire sur les titres des samples dans le graphe (ça dépasse et c'est moche)

#1892 · opened Nov 29, 2016 by Vidjil Team old_tracker client-ugly priority-4-week
- CLOSED
- 0
updated Nov 29, 2016
Export graph : ne fonctionne pas si le graphe est caché

#1893 · opened Nov 29, 2016 by Vidjil Team
- CLOSED
- 1
updated Apr 16, 2018
Demande de confirmation avant de changer de patient

#1894 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug
- CLOSED
- 1
updated Apr 16, 2018
mode serveur : menu du browser ambigue

#1897 · opened Nov 29, 2016 by Vidjil Team
- CLOSED
- 1
updated Apr 16, 2018
Scatterplot : raccourcis en chiffre lorsque >9 ?

#1898 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go client-keyboard priority-2
- CLOSED
- 0
updated Nov 29, 2016
export fasta : retirer les point dans les séquences des germlines

#1899 · opened Nov 29, 2016 by Vidjil Team BRU-Bruxelles bio-germlines client-export priority-2
- CLOSED
- 1
- 0
updated Jul 24, 2018
rapport pdf : n'affiche pas l'état actuel du graphe (à voir avec Aurélie)

#1900 · opened Nov 29, 2016 by Vidjil Team old_tracker client-rapport
- CLOSED
- 1
updated Apr 14, 2017
/mnt/data-rby ne répond pas

#1902 · opened Nov 29, 2016 by Vidjil Team old_tracker priority-4-week
- CLOSED
- 0
updated Nov 29, 2016
Le log est celui d'analysis et pas celui du fuse

#1903 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug priority-4-week repseq-formats server-fuse
- CLOSED
- 0
updated Nov 29, 2016
multi sélection : bug affichage dans le segmenteur

#1904 · opened Nov 29, 2016 by Vidjil Team !!-bug client-aligner priority-2
- CLOSED
- 1
updated Apr 16, 2018
Les notifications (en bas à droite) sont cachées par la page serveur

#1905 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug client-database client-notifications priority-5-today
- CLOSED
- 0
updated Nov 09, 2017
Un utilisateur standard ne peut pas supprimer un fichier qu'il a uploadé

#1906 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug priority-5-today server-database
- CLOSED
- 0
updated Nov 29, 2016
Suppression et modification impossible des patients sur rbx

#1907 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug client-database priority-4-week server-database
- CLOSED
- 0
updated Nov 29, 2016
Suppression de patients : mauvais nombre de fichier indiqué

#1908 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug priority-4-week server-database
- CLOSED
- 0
updated Nov 29, 2016
CI pousse sur test.vidjil.org même quand les tests échouent

#1909 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug dev-ci priority-3-month
- CLOSED
- 0
updated Nov 29, 2016
Le colorby ne change pas entre deux analyses

#1910 · opened Nov 29, 2016 by Vidjil Team old_tracker priority-2
- CLOSED
- 1
updated Nov 29, 2017
Browser help : 404

#1912 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug priority-5-today server
- CLOSED
- 0
updated Nov 29, 2016
Affichage de la boîte d'information en haut à gauche

#1913 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug client priority-5-today
- CLOSED
- 0
updated Nov 29, 2016
AAP Hétérogénéité clonale

#1916 · opened Nov 29, 2016 by Vidjil Team old_tracker priority-5-today
- CLOSED
- 0
updated Nov 29, 2016
Taille des fichiers en BD incorrecte (pour les gros fichiers)

#1917 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug priority-3-month server-database
- CLOSED
- 0
updated Nov 29, 2016
Labels du scatterplot sont à ? pour les gènes

#1918 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug client-grid priority-3-month
- CLOSED
- 0
updated Nov 29, 2016
Retour à l'utilisateur lorsque la requête prend un peu de temps

#1920 · opened Nov 29, 2016 by Vidjil Team old_tracker client-ergonomy priority-3-month server
- CLOSED
- 1
updated Nov 24, 2017
Résumé JOBIM

#1923 · opened Nov 29, 2016 by Vidjil Team old_tracker priority-5-today
- CLOSED
- 0
updated Nov 29, 2016
fuse.py garde les infos du meilleur top

#1926 · opened Nov 29, 2016 by Vidjil Team old_tracker priority-3-month server-fuse wont-fix
- CLOSED
- 0
updated Aug 20, 2019
Liste d'upload cachée par la fenêtre du serveur

#1932 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug client-ergonomy priority-3-month server-database
- CLOSED
- 0
updated Nov 29, 2016
2 commits prod-server non mergés

#1933 · opened Nov 29, 2016 by Vidjil Team old_tracker priority-5-today
- CLOSED
- 0
updated Nov 29, 2016
file/add.html: Server error sur le auto-complete patient/run

#1934 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug priority-5-today
- CLOSED
- 0
updated Nov 29, 2016
IndexError: list index out of range dans le contrôleur get_data

#1935 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug priority-5-today server-database
- CLOSED
- 0
updated Nov 29, 2016
representative-N.should-get

#1937 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug priority-4-week
- CLOSED
- 0
updated Nov 29, 2016
VidjilAuth.get_permission(): le cache est-il fonctionnel ?

#1939 · opened Nov 29, 2016 by Vidjil Team old_tracker priority-3-month server-auth
- CLOSED
- 0
updated Jan 31, 2017
Lorsque une partie des fichiers est runné, des métadata des mauvais fichiers sont affichés

#1940 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug BRU-Bruxelles priority-4-week server
- CLOSED
- 0
updated Nov 29, 2016
Index/diversité et fuse.py

#1941 · opened Nov 29, 2016 by Vidjil Team !!-bug bio-diversity priority-3-month server-fuse
- CLOSED
- 1
- 3
updated Jul 24, 2018
algo: Release 2016-07

#1942 · opened Nov 29, 2016 by Vidjil Team old_tracker priority-5-today
- CLOSED
- 0
updated Jun 10, 2020
Erreurs serveurs dans les runs

#1946 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug *-go priority-4-week server
- CLOSED
- 0
updated Nov 29, 2016
Le format du champs seg a évolué : comment doit-il être ?

#1947 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go doc priority-3-month repseq-formats
- CLOSED
- 0
updated Nov 29, 2016
Quand on a le choix entre plusieurs points, choisit-on vraiment la représentative la plus pertinente ?

#1949 · opened Nov 29, 2016 by Vidjil Team !-reflexion cpp-representative server-fuse
- CLOSED
- 1
updated Aug 20, 2019
Bug indéterminé sur la vue d'un sample set

#1953 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug *-go client priority-4-week server-sample-sets
- CLOSED
- 0
updated Mar 14, 2017
Rendre lisible les erreurs javascript

#1954 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go dev-robust priority-5-today
- CLOSED
- 0
updated Nov 29, 2016
Les identifiants de clones ne sont pas uniques pour MiXCR

#1955 · opened Nov 29, 2016 by Vidjil Team old_tracker !-reflexion priority-4-week repseq-mixcr server-fuse
- CLOSED
- 0
updated Nov 29, 2016
Compare samples ne fonctionne pas pour un run

#1957 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug *-go priority-4-week server-database server-sample-sets
- CLOSED
- 0
updated Mar 14, 2017
Les valeurs seg.5/4/3 sont désormais basées sur 1 : mettre à jour le browser

#1958 · opened Nov 29, 2016 by Vidjil Team old_tracker client priority-5-today repseq-formats
- CLOSED
- 0
updated Jun 10, 2020
Tutorial

#1959 · opened Nov 29, 2016 by Vidjil Team old_tracker com-first-time-user doc priority-5-today
- CLOSED
- 0
updated Dec 27, 2016
Relancer un pre-process qui a échoué

#1960 · opened Nov 29, 2016 by Vidjil Team feature priority-2 server server-pre-process
- CLOSED
- 1
updated May 19, 2017
Erreur la page des logs lorsque connecté en tant que Aurélie

#1962 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug *-go priority-5-today server
- CLOSED
- 0
updated Nov 29, 2016
doc/analysis-example, make, test fuse

#1965 · opened Nov 29, 2016 by Vidjil Team old_tracker dev-build dev-tests priority-2
- CLOSED
- 0
updated Nov 29, 2016
Les infos du sample n'apparaissent pas dans l'analysis

#1966 · opened Nov 29, 2016 by Vidjil Team !!-bug *-go client client-export priority-2
- CLOSED
- 4
updated Jan 03, 2017
Repasser en -t 0 par défaut au lieu de -t 100 (trim)

#1967 · opened Nov 29, 2016 by Vidjil Team bio-trim priority-4-week
- CLOSED
- 0
updated Oct 31, 2017
calcul representative, arrêt length_longest_run, quality et vitesse

#1969 · opened Nov 29, 2016 by Vidjil Team old_tracker cpp-representative cpp-speed priority-3-month
- CLOSED
- 0
updated Nov 29, 2016
Autodelete fonctionne à moitié ?

#1973 · opened Nov 29, 2016 by Vidjil Team !!-bug priority-3-month server-database
- CLOSED
- 1
updated Oct 26, 2017
Nouvelle dimension 'nb samples with this clone', comparaison de samples

#1974 · opened Nov 29, 2016 by Vidjil Team old_tracker client-axis client-grid priority-3-month
- CLOSED
- 0
updated Nov 26, 2019
Nouvelle vue pour comparer beaucoup de samples

#1975 · opened Nov 29, 2016 by Vidjil Team app-stats client client-views priority-2 server-compare-samples
- CLOSED
- 1
updated Dec 04, 2020
maintenir le « color by » en changeant de patient

#1977 · opened Nov 29, 2016 by Vidjil Team old_tracker client-ergonomy priority-3-month
- CLOSED
- 0
updated Nov 29, 2016
Pouvoir fixer la fenêtre du segmenter avec beaucoup de séquences

#1978 · opened Nov 29, 2016 by Vidjil Team LIL-Lille client-aligner client-ergonomy client-ugly priority-3-month
- CLOSED
- 3
updated Jan 18, 2017
Titre de la page HTML parfois faux ?

#1980 · opened Nov 29, 2016 by Vidjil Team old_tracker priority-2
- CLOSED
- 1
updated Apr 16, 2018
SampleSets : controlleurs génériques

#1983 · opened Nov 29, 2016 by Vidjil Team priority-3-month
- CLOSED
- 0
updated May 19, 2017
Le -c segment devrait sortir un .vidjil

#1984 · opened Nov 29, 2016 by Vidjil Team old_tracker cpp cpp-finesegmenter priority-2
- CLOSED
- 0
updated Nov 29, 2016
Requêtes incessantes à scheduler_task et scheduler_worker

#1985 · opened Nov 29, 2016 by Vidjil Team old_tracker priority-3-month server-database
- CLOSED
- 0
updated Dec 19, 2017
Ajouter l'organisme dans le fichier .vidjil

#1987 · opened Nov 29, 2016 by Vidjil Team Algo 2017.03 LIM-Limoges TOU-Toulouse bio-germlines bio-species priority-2 repseq-formats
- CLOSED
- 1
- 3
updated Feb 02, 2017
Release 2016.09

#1991 · opened Nov 29, 2016 by Vidjil Team old_tracker com cpp priority-4-week
- CLOSED
- 0
updated Nov 29, 2016
vidjil/segmenter: utiliser le .vidjil

#1993 · opened Nov 29, 2016 by Vidjil Team app-analyze client-aligner priority-2
- CLOSED
- 1
updated Apr 11, 2017
Garder des séquences d'intérêt : -W / -@

#1997 · opened Nov 29, 2016 by Vidjil Team old_tracker cpp cpp-options priority-2
- CLOSED
- 0
updated Jan 17, 2019
Jenkins et SHOULD_*_EXPECTED_FAILS

#1999 · opened Nov 29, 2016 by Vidjil Team old_tracker dev-build dev-tests priority-4-week
- CLOSED
- 0
updated Nov 29, 2016
Redirection de / vers /browser en HTTPS

#2008 · opened Nov 29, 2016 by Vidjil Team old_tracker priority-2 server server-config
- CLOSED
- 0
updated Nov 29, 2016
CSS/JS manquant pour l'admin de dev.vidjil.org

#2009 · opened Nov 29, 2016 by Vidjil Team old_tracker priority-2 server server-config
- CLOSED
- 0
updated Nov 29, 2016
Erreur lors de l'annulation d'upload

#2010 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug client priority-2
- CLOSED
- 1
updated Dec 13, 2016
Un mauvais commit traine dans dev, à rebaser

#2013 · opened Nov 29, 2016 by Vidjil Team old_tracker priority-4-week
- CLOSED
- 1
updated Feb 01, 2017
Tester l'affichage des "smaller clones"

#2022 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug client dev-tests-watir priority-2
- CLOSED
- 0
updated Nov 18, 2017
Merge reads et .fasta

#2023 · opened Nov 29, 2016 by Vidjil Team priority-2 server-pre-process wont-fix
- CLOSED
- 1
updated Apr 16, 2018
Les smaller clones disparaissent de la liste dès qu'on les survole

#2025 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug client-cloneList priority-3-month
- CLOSED
- 0
updated Nov 29, 2016
Beaucoup de FAILED dans le Vidjil Morning du jour

#2027 · opened Nov 29, 2016 by Vidjil Team old_tracker priority-5-today
- CLOSED
- 0
updated May 23, 2018
Modifier le contrôleur du segmenteur pour permettre l'interaction avec la page d'Armand

#2032 · opened Nov 29, 2016 by Vidjil Team app-analyze priority-3-month server
- CLOSED
- 2
updated Apr 12, 2017
L'alignement multiple plante quand la première séquence est retirée

#2041 · opened Dec 02, 2016 by Mikaël Salson !!-bug *-go LIL-Lille client-aligner priority-3-month server-cgi user-request
- CLOSED
- 1
- 3
updated Apr 03, 2019
Après un compare samples, aucun système n'est sélectionné par défaut dans le scatterplot

#2044 · opened Dec 06, 2016 by Mikaël Salson !!-bug *-go client-grid server-compare-samples
- CLOSED
- 1
updated Dec 13, 2016
La séquence n'est pas ajoutée au segmenteur lorsqu'elle n'est pas segmentée

#2045 · opened Dec 06, 2016 by Mikaël Salson !!-bug client-aligner
- CLOSED
- 2
updated Oct 23, 2019
Ne pas recalculer à chaque affichage les positions de features basées sur des chaînes de caractères

#2047 · opened Dec 08, 2016 by Mathieu Giraud bio-AA bio-primers client client-aligner
- CLOSED
- 3
updated Feb 16, 2018
Visualisation de la liste des pre-process

#2048 · opened Dec 08, 2016 by Mathieu Giraud client-database server server-database server-pre-process
- CLOSED
- 2
updated Dec 14, 2016
Faire une erreur propre lorsqu'on utilise un client frais, sans avoir fait `make germline`

#2050 · opened Dec 08, 2016 by Ghost User *-go client client-menu doc
- CLOSED
- 6
updated Dec 08, 2016
Avoir une variable DIR_PEAR pour le preprocess pear

#2051 · opened Dec 08, 2016 by Mikaël Salson dev-robust server server-config server-pre-process
- CLOSED
- 0
updated Jan 04, 2017
Mise à jour de web2py et nouvelles fonctionnalités

#2055 · opened Dec 12, 2016 by Mathieu Giraud dev-policy server server-task.py
- CLOSED
- 1
updated Jan 22, 2020
Afficher les mutations synonymes/silencieuses dans le segmenteur

#2056 · opened Dec 12, 2016 by Mikaël Salson CLL-2018-septembre LIL-Lille Paris-Pitié bio-AA bio-CLL client client-aligner feature user-request
- CLOSED
- 1
- 13
updated Apr 18, 2019
Formulaire admin pour modifier un groupe

#2057 · opened Dec 12, 2016 by Mikaël Salson client-ergonomy server server-admin server-groups
- CLOSED
- 0
updated Jan 31, 2017
Tutorial : Mettre un fichier démo de L3 sans analyse déjà faite

#2058 · opened Dec 12, 2016 by Mikaël Salson Web 2017.11 com-first-time-user doc shell-log
- CLOSED
- 9
updated Nov 20, 2017
Ajouter un bouton "export Fasta" dans le segmenteur autonome

#2067 · opened Dec 15, 2016 by Mathieu Giraud app-analyze client client-aligner client-export
- CLOSED
- 5
updated Apr 03, 2017
Retour à l'utilisateur quand on envoie une requête sur le segmenteur autonome 2 of 2 tasks completed

#2070 · opened Dec 15, 2016 by Mikaël Salson app-analyze client client-ergonomy
- CLOSED
- 4
updated Feb 02, 2017
Coûts du FineSegmenter et documentation de -f

#2076 · opened Dec 19, 2016 by Mathieu Giraud Algo 2017.11 *-go cpp cpp-finesegmenter cpp-options doc
- CLOSED
- 1
- 1
updated Nov 17, 2017
Sur la page d'un utilisateur, voir aussi le groupe "uniquely assigned to user Xxx"

#2077 · opened Dec 20, 2016 by Mathieu Giraud server server-groups
- CLOSED
- 0
updated Jan 31, 2017
problème d'upload a l'utilisation de vidjil en diagnostic a lille

#2079 · opened Dec 23, 2016 by Ghost User !-hard LIL-Lille server-upload
- CLOSED (MOVED)
- 0
updated Dec 29, 2016
vidjil-to-fasta.py, object of type 'NoneType' has no len()

#2088 · opened Jan 03, 2017 by Mathieu Giraud !!-bug
- CLOSED
- 2
updated Jan 03, 2017
vidjil-to-fasta.py : erreur "unsupported operand type(s) for +: 'NoneType' and 'int'" lors de l'exécution

#2089 · opened Jan 04, 2017 by Tatiana Rocher !!-bug
- CLOSED
- 0
updated Jan 04, 2017
Erreur de chargement de fichier sans association à un sample set

#2090 · opened Jan 05, 2017 by Ryan Herbert !!-bug client server server-sample-sets
- CLOSED
- 2
updated Mar 14, 2017
L'axe "V distribution" ne fonctionne pas sur Stanford_S22

#2091 · opened Jan 09, 2017 by Mathieu Giraud !!-bug client client-axis client-grid
- CLOSED
- 0
updated Jan 12, 2017
Sélection multiple en cliquant sur le label de l'axe y

#2092 · opened Jan 09, 2017 by Mathieu Giraud client client-bar client-grid feature
- CLOSED
- 2
updated May 22, 2017
Manipulation des URL: comment le faire ?

#2096 · opened Jan 10, 2017 by Mathieu Giraud client client-api
- CLOSED
- 2
updated Mar 30, 2017
API/URL: ?clones=1,15,54

#2097 · opened Jan 10, 2017 by Mathieu Giraud client client-api
- CLOSED
- 1
- 2
updated Mar 17, 2017
Téléchargement des fichiers fused et analyse

#2102 · opened Jan 12, 2017 by Mikaël Salson !!-bug server server-api server-sample-sets
- CLOSED
- 0
updated Mar 22, 2017