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  • vidjilvidjil
  • Issues

  • Open 1,694
  • Closed 1,910
  • All 3,604
New issue
  • Priority Created date Last updated Milestone due date Due date Popularity Label priority Manual
  • chasse aux pixels
    #923 · opened Nov 29, 2016 by Vidjil Team   old_tracker *-too-vague client client-ergonomy client-less-css priority-1-low
    • CLOSED
    • 0
    updated Nov 20, 2018
  • Traitement des options : supprimer docopt, choisir autre solution
    #926 · opened Nov 29, 2016 by Vidjil Team   Algo 2017.11   !-hard cpp cpp-compiler cpp-options priority-1-low
    • CLOSED
    • 1
    • 8
    updated Oct 19, 2017
  • lisibilité du graphique
    #927 · opened Nov 29, 2016 by Vidjil Team   old_tracker client client-graph priority-5-today
    • CLOSED
    • 0
    updated Nov 29, 2016
  • vidjil.cpp: rationaliser les options -% -R -z... et -r
    #928 · opened Nov 29, 2016 by Vidjil Team   old_tracker cpp cpp-options priority-5-today
    • CLOSED
    • 0
    updated Jan 26, 2017
  • vidjil.cpp: .json doit avoir les même limites que stdout
    #929 · opened Nov 29, 2016 by Vidjil Team   old_tracker cpp priority-1-low
    • CLOSED
    • 1
    updated Sep 12, 2017
  • Algo multi-systèmes 1.5 : intégrer un objet Germline
    #930 · opened Nov 29, 2016 by Vidjil Team   old_tracker !-hard !-important *-go bio-germlines cpp cpp-heuristic feature priority-3-month
    • CLOSED
    • 0
    updated Nov 29, 2016
  • définir l'objet Germline, MultiGermline
    #931 · opened Nov 29, 2016 by Vidjil Team   old_tracker !-hard !-important *-go bio-germlines cpp cpp-heuristic feature priority-3-month sub
    • CLOSED
    • 0
    updated Nov 29, 2016
  • à parser depuis germline.data
    #932 · opened Nov 29, 2016 by Vidjil Team   old_tracker !-hard !-important *-go bio-germlines cpp cpp-heuristic feature priority-3-month sub
    • CLOSED
    • 0
    updated Nov 29, 2016
  • AffectAnalyzer prend un MultiGermline, coeur de l'heuristique
    #933 · opened Nov 29, 2016 by Vidjil Team   old_tracker !-hard !-important *-go bio-germlines cpp cpp-heuristic feature priority-3-month sub
    • CLOSED
    • 0
    updated Nov 29, 2016
  • AffectAnalyzer renvoie l'info du Germline choisi
    #934 · opened Nov 29, 2016 by Vidjil Team   old_tracker !-hard !-important *-go bio-germlines cpp cpp-heuristic feature priority-3-month sub
    • CLOSED
    • 0
    updated Nov 29, 2016
  • FineSegmenter considère le bon Germline
    #935 · opened Nov 29, 2016 by Vidjil Team   old_tracker !-hard !-important *-go bio-germlines cpp cpp-heuristic feature priority-3-month sub
    • CLOSED
    • 0
    updated Nov 29, 2016
  • FineSegmenter prend un Germline
    #936 · opened Nov 29, 2016 by Vidjil Team   old_tracker !-hard !-important *-go bio-germlines cpp cpp-heuristic feature priority-3-month sub
    • CLOSED
    • 0
    updated Nov 29, 2016
  • MultiGermline passé de vidjil.cpp à segmenter.cpp
    #937 · opened Nov 29, 2016 by Vidjil Team   old_tracker !-hard !-important *-go bio-germlines cpp cpp-heuristic feature priority-3-month sub
    • CLOSED
    • 0
    updated Nov 29, 2016
  • réparer les tests unitaires :)
    #938 · opened Nov 29, 2016 by Vidjil Team   old_tracker !-hard !-important *-go bio-germlines cpp cpp-heuristic feature priority-3-month sub
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Le Germline choisi est transféré à vidjil.cpp
    #939 · opened Nov 29, 2016 by Vidjil Team   old_tracker !-hard !-important *-go bio-germlines cpp cpp-heuristic feature priority-3-month sub
    • CLOSED
    • 0
    updated Nov 29, 2016
  • faire aussi CMD_GERMLINES avec le MultiGermline
    #940 · opened Nov 29, 2016 by Vidjil Team   old_tracker !-hard !-important *-go bio-germlines cpp cpp-heuristic feature priority-3-month sub
    • CLOSED
    • 0
    updated Nov 29, 2016
  • germlines: souris
    #941 · opened Nov 29, 2016 by Vidjil Team   old_tracker PAN-Necker bio-germlines bio-species priority-5-today
    • CLOSED
    • 0
    updated Jan 24, 2017
  • Tableur / tables plus dynamiques
    #944 · opened Nov 29, 2016 by Vidjil Team   !-reflexion client feature server-speed
    • CLOSED (MOVED)
    • 4
    updated Apr 17, 2019
  • pseudo-germlines
    #945 · opened Nov 29, 2016 by Vidjil Team   old_tracker LIL-Lille PAN-Necker bio-germlines priority-5-today
    • CLOSED
    • 0
    updated Nov 29, 2016
  • champs pcr/sequencer/producer pour sequence file
    #946 · opened Nov 29, 2016 by Vidjil Team   old_tracker client-autocomplete priority-4-week server-database
    • CLOSED
    • 0
    updated Oct 10, 2017
  • ajouter les champs a la bdd
    #947 · opened Nov 29, 2016 by Vidjil Team   old_tracker priority-4-week server-database sub
    • CLOSED
    • 0
    updated Nov 29, 2016
  • ajouter une liste de sugestion/autocompletion
    #948 · opened Nov 29, 2016 by Vidjil Team   old_tracker client-autocomplete priority-4-week server-database sub
    • CLOSED
    • 0
    updated Oct 10, 2017
  • Format commun et universel (.vdj, .json, .xml ?)
    #949 · opened Nov 29, 2016 by Vidjil Team   old_tracker !-reflexion repseq-Nikos repseq-community repseq-standardization
    • CLOSED
    • 1
    updated Nov 20, 2018
  • .vdj : inclure (IMGT-)CDR3 ?
    #950 · opened Nov 29, 2016 by Vidjil Team   old_tracker !-reflexion cpp priority-1-low repseq-standardization
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Release 2014-07
    #951 · opened Nov 29, 2016 by Vidjil Team   old_tracker priority-5-today
    • CLOSED
    • 0
    updated Nov 29, 2016
  • algo: Release 2014-09
    #952 · opened Nov 29, 2016 by Vidjil Team   old_tracker cpp priority-3-month
    • CLOSED
    • 0
    updated Nov 29, 2016
  • C++: un module AA qui détecte ce qu'il faut (position + traduction), appelé quand on FineSegmenter
    #954 · opened Nov 29, 2016 by Vidjil Team   old_tracker *-go bio-AA client client-aligner feature priority-5-today sub
    • CLOSED
    • 0
    updated Nov 29, 2016
  • récupérer les infos depuis le .vidjil
    #955 · opened Nov 29, 2016 by Vidjil Team   old_tracker *-go bio-AA client client-aligner feature priority-5-today sub
    • CLOSED
    • 0
    updated Nov 29, 2016
  • js: afficher les bornes Cys et Phe/Trp (sur la séquence nucl dans le segmenter)
    #956 · opened Nov 29, 2016 by Vidjil Team   old_tracker *-go bio-AA client client-aligner feature priority-5-today sub
    • CLOSED
    • 0
    updated Nov 29, 2016
  • upgrader le fuse.py pour le faire depuis le .clntab
    #958 · opened Nov 29, 2016 by Vidjil Team   old_tracker *-go bio-AA client client-aligner feature priority-5-today sub
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Jenkins : intégration continue pour les tests browser
    #959 · opened Nov 29, 2016 by Vidjil Team   old_tracker dev-ci dev-tests priority-4-week
    • CLOSED
    • 0
    updated Nov 29, 2016
  • read (voir dump db)
    #961 · opened Nov 29, 2016 by Vidjil Team   old_tracker client priority-2 server sub
    • CLOSED
    • 0
    updated Dec 11, 2020
  • read/write (restocker les .analysis ?)
    #962 · opened Nov 29, 2016 by Vidjil Team   old_tracker client priority-2 server sub
    • CLOSED
    • 0
    updated Dec 11, 2020
  • switch module Vojtech
    #963 · opened Nov 29, 2016 by Vidjil Team   old_tracker *-too-vague priority-5-today repseq-Nikos
    • CLOSED
    • 0
    updated Nov 29, 2016
  • less.css, servi par Apache ? versionné ?
    #964 · opened Nov 29, 2016 by Vidjil Team   old_tracker client-less-css priority-5-today
    • CLOSED
    • 0
    updated Nov 29, 2016
  • package Vidjil autonome: data exemple, germlines ?
    #966 · opened Nov 29, 2016 by Vidjil Team   old_tracker bio-germlines priority-5-today
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Antonin : refaire marcher dbscan en javascript
    #967 · opened Nov 29, 2016 by Vidjil Team   old_tracker client cpp priority-2 server-fuse
    • CLOSED
    • 1
    updated Apr 09, 2018
  • parser .clntab: trouver mieux que -x/-y/-z
    #968 · opened Nov 29, 2016 by Vidjil Team   old_tracker priority-3-month repseq-Nikos repseq-community server-fuse
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Align : lettres décalées
    #969 · opened Nov 29, 2016 by Vidjil Team   old_tracker !!-bug client client-aligner priority-3-month
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Export pdf avec scientifique au lieu de %
    #970 · opened Nov 29, 2016 by Vidjil Team   old_tracker REN-Rennes client-export priority-5-today
    • CLOSED
    • 0
    updated Nov 29, 2016
  • segmenter : igBlastSegmenter / IMGTSegmenter
    #972 · opened Nov 29, 2016 by Vidjil Team   old_tracker !-reflexion client-aligner com priority-5-today repseq-community
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Pointer address in windows.fa
    #974 · opened Nov 29, 2016 by Vidjil Team   old_tracker !!-bug cpp priority-2
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Affichage de l'affect analyser ne correspondant pas à la réalité ?
    #975 · opened Nov 29, 2016 by Vidjil Team   old_tracker !!-bug cpp priority-4-week
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Séquences segmentées mais fenêtres non trouvées (J trop court)
    #976 · opened Nov 29, 2016 by Vidjil Team   old_tracker bio-analyze-more bio-control cpp cpp-heuristic priority-2
    • CLOSED
    • 1
    updated Nov 20, 2018
  • diagnostic sur toutes nos séquences
    #977 · opened Nov 29, 2016 by Vidjil Team   old_tracker bio-analyze-more bio-control cpp cpp-heuristic priority-2 sub
    • CLOSED
    • 0
    updated Nov 20, 2018
  • segmenter.cpp: séparer UNSEG_strand en deux cas (vraiment pas beaucoup d'affect ou pas)
    #978 · opened Nov 29, 2016 by Vidjil Team   old_tracker bio-control cpp-heuristic priority-4-week
    • CLOSED
    • 0
    updated Nov 21, 2019
  • merger affect_heuristic / online_affect
    #979 · opened Nov 29, 2016 by Vidjil Team   old_tracker !-important bio-analyze-more cpp-heuristic priority-5-today
    • CLOSED
    • 0
    updated Nov 29, 2016
  • revérifier la vitesse (une fois qu'on aura déjà viré FineSegmenter), tests TRG : bof, finalement pas la peine
    #980 · opened Nov 29, 2016 by Vidjil Team   old_tracker !-important bio-analyze-more cpp-heuristic priority-5-today sub
    • CLOSED
    • 0
    updated Nov 29, 2016
  • alertes à l'utilisateur en fonction de certaines raisons de non-segmentation
    #981 · opened Nov 29, 2016 by Vidjil Team   old_tracker bio-control client client-warning cpp-heuristic priority-1-low
    • CLOSED
    • 1
    updated Nov 20, 2018
  • revoir download controller
    #982 · opened Nov 29, 2016 by Vidjil Team   old_tracker priority-1-low server
    • CLOSED
    • 1
    updated Dec 11, 2020
  • Fusionner plusieurs germline avec fuse.py
    #983 · opened Nov 29, 2016 by Vidjil Team   old_tracker !!-bug bio-germlines priority-1-low server-fuse
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Erreur de substr sur Del-88-DD
    #984 · opened Nov 29, 2016 by Vidjil Team   old_tracker !!-bug cpp priority-4-week
    • CLOSED
    • 0
    updated Nov 29, 2016
  • trouver le bug : dans la segmentation d'un clone
    #985 · opened Nov 29, 2016 by Vidjil Team   old_tracker !!-bug cpp priority-4-week sub
    • CLOSED
    • 0
    updated Nov 29, 2016
  • faire que rattraper exceptions fonctionne
    #986 · opened Nov 29, 2016 by Vidjil Team   old_tracker !!-bug cpp priority-4-week sub
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Séparer les "smaller clones" par locus
    #989 · opened Nov 29, 2016 by Vidjil Team   old_tracker PAN-Necker bio-germlines client cpp priority-4-week server-fuse
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Séparer le clone virtuel "other" en plusieurs paquets
    #990 · opened Nov 29, 2016 by Vidjil Team   old_tracker !-hard client client-export client-graph client-virtual-clone com-paper priority-2 repseq-Nikos server-fuse
    • CLOSED
    • 2
    updated Oct 29, 2019
  • Déselection des clones dans l'aligneur
    #991 · opened Nov 29, 2016 by Vidjil Team   old_tracker *-go client-aligner priority-1-low
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Surligner la ligne survolée dans l'aligneur
    #992 · opened Nov 29, 2016 by Vidjil Team   old_tracker *-go client-aligner feature priority-1-low
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Label de la checkbox normalization pas mis à jour lorsqu'on change de jeu de données
    #993 · opened Nov 29, 2016 by Vidjil Team   old_tracker !!-bug bio-control client client-normalization priority-2
    • CLOSED
    • 0
    updated Apr 03, 2017
  • Test navigateur ne passe plus
    #994 · opened Nov 29, 2016 by Vidjil Team   old_tracker !!-bug client dev-tests priority-2
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Arrêter de produire les fichiers seq/windows.fa-*
    #995 · opened Nov 29, 2016 by Vidjil Team   old_tracker cpp priority-2
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Séquences manquantes
    #997 · opened Nov 29, 2016 by Vidjil Team   old_tracker client feature priority-1-low
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Comparer plusieurs samples : log-log
    #998 · opened Nov 29, 2016 by Vidjil Team   old_tracker !-hard !-important !-reflexion *-too-vague client client-log-log feature priority-3-month
    • CLOSED
    • 0
    updated Mar 21, 2019
  • Alignement de la police monospace
    #999 · opened Nov 29, 2016 by Vidjil Team   old_tracker !!-bug client-aligner priority-2
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Align puis ajout autre seqs: complètement décalées
    #1001 · opened Nov 29, 2016 by Vidjil Team   old_tracker !!-bug client-aligner priority-1-low
    • CLOSED
    • 0
    updated Nov 29, 2016
  • dynprog: Gotoh / gaps multiples
    #1002 · opened Nov 29, 2016 by Vidjil Team   old_tracker cpp-dynprog priority-1-low
    • CLOSED
    • 0
    updated Nov 29, 2016
  • dynprog: refactorer, nettoyer
    #1003 · opened Nov 29, 2016 by Vidjil Team   old_tracker !-hard !-important cpp-dynprog cpp-finesegmenter priority-2
    • CLOSED
    • 0
    updated Nov 29, 2016
  • interesting substrings: si on colle des morceaux, peut-être mettre un tiret entre
    #1005 · opened Nov 29, 2016 by Vidjil Team   old_tracker priority-5-today server-fuse
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Voir le résultat de -c germlines dans le browser
    #1011 · opened Nov 29, 2016 by Vidjil Team   old_tracker *-too-vague bio-control bio-germlines client cpp priority-5-today server server-fuse
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Alerte "attention, vos changements vont être perdus"
    #1014 · opened Nov 29, 2016 by Vidjil Team   old_tracker *-go client priority-4-week
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Épaisseur de la police
    #1015 · opened Nov 29, 2016 by Vidjil Team   client client-design client-ergonomy client-less-css priority-1-low
    • CLOSED
    • 0
    updated Nov 15, 2017
  • Légende des points si trop de points
    #1016 · opened Nov 29, 2016 by Vidjil Team   old_tracker !-reflexion client-graph priority-1-low
    • CLOSED
    • 1
    updated Dec 11, 2020
  • Renommage des clones, des times points : on devrait pouvoir valider par [Entrée]
    #1018 · opened Nov 29, 2016 by Vidjil Team   old_tracker !!-bug *-go client client-ergonomy priority-3-month
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Vue admin, monitor
    #1019 · opened Nov 29, 2016 by Vidjil Team   old_tracker *-go client priority-3-month server server-admin
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Rentrer des .clntab directement dans le browser
    #1021 · opened Nov 29, 2016 by Vidjil Team   old_tracker feature priority-3-month repseq-Nikos repseq-community server server-database server-fuse
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Légende du scatterplot pour le multi-système
    #1022 · opened Nov 29, 2016 by Vidjil Team   old_tracker bio-germlines client client-grid priority-2
    • CLOSED
    • 0
    updated Nov 29, 2016
  • ordre des timepoints dans la fenetre d'info
    #1023 · opened Nov 29, 2016 by Vidjil Team   old_tracker !!-bug client priority-2
    • CLOSED
    • 0
    updated Nov 29, 2016
  • export pdf - multisystèmes
    #1024 · opened Nov 29, 2016 by Vidjil Team   old_tracker !!-bug !-reflexion client client-export priority-2
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Batch upload d'un ensemble de runs : se souvenir des derniers paramètres
    #1028 · opened Nov 29, 2016 by Vidjil Team   old_tracker *-go client client-ergonomy priority-2 server
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Jenkins: job de test rapide
    #1031 · opened Nov 29, 2016 by Vidjil Team   old_tracker priority-5-today
    • CLOSED
    • 0
    updated Nov 29, 2016
  • export pdf: améliorer les courbes pour inclusion dans l'article
    #1032 · opened Nov 29, 2016 by Vidjil Team   old_tracker client client-export client-graph com-paper priority-3-month
    • CLOSED
    • 0
    updated Nov 29, 2016
  • key des pourcentage bien centrée en y
    #1033 · opened Nov 29, 2016 by Vidjil Team   old_tracker client client-export client-graph com-paper priority-3-month sub
    • CLOSED
    • 0
    updated Nov 29, 2016
  • légende dans ou à côté de la courbe ? (ou mini-courbe, à discuter ?)
    #1034 · opened Nov 29, 2016 by Vidjil Team   old_tracker client client-export client-graph com-paper priority-3-month sub
    • CLOSED
    • 0
    updated Nov 29, 2016
  • sortie uniquement la courbe, avec une bonne BoundingBox (on peut couper dans le .pdf mais ce n'est pas très propre)
    #1035 · opened Nov 29, 2016 by Vidjil Team   old_tracker client client-export client-graph com-paper priority-3-month sub
    • CLOSED
    • 0
    updated Nov 29, 2016
  • passe en noir et blanc (pas important pour l'instant)
    #1036 · opened Nov 29, 2016 by Vidjil Team   old_tracker client client-export client-graph com-paper priority-3-month sub
    • CLOSED
    • 0
    updated Nov 29, 2016
  • labels plus gros
    #1037 · opened Nov 29, 2016 by Vidjil Team   old_tracker client client-export client-graph com-paper priority-3-month sub
    • CLOSED
    • 0
    updated Nov 29, 2016
  • afficher les systèmes sélectionnés (en fait un seul : TRG ou IGH), mais il pourriat y en avoir plus
    #1038 · opened Nov 29, 2016 by Vidjil Team   old_tracker client client-export client-graph com-paper priority-3-month sub
    • CLOSED
    • 0
    updated Nov 29, 2016
  • certaines courbes en gras ne devraient pas l'être (Leu/IGH)
    #1039 · opened Nov 29, 2016 by Vidjil Team   old_tracker client client-export client-graph com-paper priority-3-month sub
    • CLOSED
    • 0
    updated Nov 29, 2016
  • grille trop visible
    #1040 · opened Nov 29, 2016 by Vidjil Team   old_tracker client client-export client-graph com-paper priority-3-month sub
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Organisation de la doc
    #1042 · opened Nov 29, 2016 by Vidjil Team   old_tracker priority-5-today
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Stats sur les clones sélectionnés
    #1043 · opened Nov 29, 2016 by Vidjil Team   old_tracker *-go client client-ergonomy feature priority-3-month
    • CLOSED
    • 0
    updated Nov 29, 2016
  • afficher "7 clones (54554 reads, 31.2%)"
    #1044 · opened Nov 29, 2016 by Vidjil Team   old_tracker *-go client client-ergonomy feature priority-3-month sub
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Récupérer l'exception si conf.js spécifie des fichiers inexistants
    #1045 · opened Nov 29, 2016 by Vidjil Team   old_tracker client priority-1-low
    • CLOSED
    • 2
    updated Oct 19, 2018
  • Désélectionner un analysis_file dans le 'import analysis'
    #1047 · opened Nov 29, 2016 by Vidjil Team   old_tracker *-go client priority-1-low
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Stats sur le jeu complet dans le fichier .vidjil / smaller clones
    #1048 · opened Nov 29, 2016 by Vidjil Team   !-hard !-reflexion client client-axis client-bar client-virtual-clone cpp cpp-finesegmenter feature priority-2 repseq-Nikos repseq-formats
    • CLOSED
    • 1
    • 3
    updated Oct 29, 2019
  • Ne pas afficher toutes les courbes dans le graphe
    #1049 · opened Nov 29, 2016 by Vidjil Team   old_tracker *-go client-graph priority-3-month
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Germline TRB ne fonctionne pas dans la version actuelle
    #1050 · opened Nov 29, 2016 by Vidjil Team   old_tracker !!-bug client priority-5-today
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Ne pas limiter le nombre de clones sélectionnés
    #1051 · opened Nov 29, 2016 by Vidjil Team   old_tracker client-aligner client-grid feature priority-3-month
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Sélection de tous les clones Vx-Jy sur le scatterplot
    #1052 · opened Nov 29, 2016 by Vidjil Team   old_tracker *-go client-ergonomy client-grid feature priority-3-month
    • CLOSED
    • 0
    updated Nov 29, 2016
  • Centrer verticalement les labels des ordonnées dans le PDF
    #1059 · opened Nov 29, 2016 by Vidjil Team   old_tracker *-go client-export com-paper priority-2
    • CLOSED
    • 0
    updated May 07, 2020
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