Issues · vidjil / vidjil

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Heuristique 1.9b : tester toutes les germlines, renvoyer la meilleure

#1397 · opened Nov 29, 2016 by Vidjil Team old_tracker cpp-heuristic priority-4-week
- CLOSED
- 0
updated Nov 29, 2016
Point virtuel "Total" tout à droite du graphique

#1396 · opened Nov 29, 2016 by Vidjil Team old_tracker !-hard !-reflexion client client-graph priority-2
- 0
updated Nov 29, 2016
Filter/search dans le 'compare patients'

#1394 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go client-ergonomy priority-3-month server-compare-samples
- CLOSED
- 0
updated Nov 29, 2016
Compare patients : et si on comparait des configs différentes ?

#1393 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go client priority-3-month server-compare-samples
- CLOSED
- 0
updated Nov 29, 2016
IKmerStore:remove()

#1391 · opened Nov 29, 2016 by Vidjil Team old_tracker priority-4-week
- CLOSED
- 0
updated Nov 29, 2016
Compare patients : dans certains cas, il ne se passe rien

#1389 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug priority-5-today server-compare-samples
- CLOSED
- 0
updated Nov 29, 2016
Compare patients : debug

#1388 · opened Nov 29, 2016 by Vidjil Team old_tracker REN-Rennes dev-robust priority-4-week server-compare-samples
- CLOSED
- 0
updated Nov 29, 2016
Par défaut, liste des patients triée par plus récent en haut

#1387 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go client-ergonomy priority-3-month
- CLOSED
- 0
updated Nov 29, 2016
export html multi-systèmes: voir aussi le % par rapport à chaque système

#1384 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go client-export priority-3-month
- CLOSED
- 0
updated Nov 29, 2016
export html: version de Vidjil (et command line / run date)

#1383 · opened Nov 29, 2016 by Vidjil Team old_tracker client client-export cpp priority-4-week server-fuse
- CLOSED
- 0
updated Nov 29, 2016
export html: remplir le div="header-title"

#1381 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go client-export priority-4-week
- CLOSED
- 0
updated Nov 29, 2016
export html: si rien de sélectionné, mettre les 2/3 clones majoritaires *par système* sous chaque scatterplot

#1380 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go client-export priority-5-today
- CLOSED
- 0
updated Nov 29, 2016
export html: Faire que les séquences soient en format Fasta

#1379 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go client-export priority-3-month
- CLOSED
- 0
updated Nov 29, 2016
BaseSpace Illumina

#1378 · opened Nov 29, 2016 by Vidjil Team old_tracker collaboration priority-1-low repseq-community
- 0
updated Nov 29, 2016
Raccourci clavier : shift-P pour revenir à la liste des patients

#1377 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go client-ergonomy client-keyboard priority-3-month
- CLOSED
- 0
updated Nov 29, 2016
scatterplot : longueur du CDR3 (nucl et AA) comme axe d'analyse

#1373 · opened Nov 29, 2016 by Vidjil Team old_tracker !-important *-go LIL-Lille PAN-Necker bio-AA client-grid feature priority-4-week
- CLOSED
- 0
updated Nov 29, 2016
traduire en AA

#1372 · opened Nov 29, 2016 by Vidjil Team old_tracker !-hard !-important bio-AA cpp feature priority-3-month repseq-formats sub
- CLOSED
- 0
updated Nov 23, 2017
détecter Cys, Phe/Trp, "vers le bon endroit" (pas trop loin de la window)

#1371 · opened Nov 29, 2016 by Vidjil Team old_tracker !-hard !-important bio-AA cpp feature priority-3-month repseq-formats sub
- CLOSED
- 0
updated Nov 29, 2016
export du C++ vers le fichier .vidjil (comme pour "seg" ?)

#1370 · opened Nov 29, 2016 by Vidjil Team old_tracker !-hard !-important bio-AA cpp feature priority-3-month repseq-formats sub
- CLOSED
- 0
updated Nov 29, 2016
Aho-Corasick: construction, implémentation

#1366 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go cpp cpp-aho priority-3-month
- CLOSED
- 0
updated Nov 29, 2016
Heuristique multi-systèmes 1.9, marquer les k-mers ambigus entre plusieurs systèmes

#1365 · opened Nov 29, 2016 by Vidjil Team old_tracker priority-4-week
- CLOSED
- 0
updated Nov 29, 2016
Dd-Ja

#1363 · opened Nov 29, 2016 by Vidjil Team old_tracker bio-germlines dev-tests-notable priority-3-month
- CLOSED
- 0
updated Nov 29, 2016
export html: transformation en .pdf par le serveur

#1359 · opened Nov 29, 2016 by Vidjil Team old_tracker !-reflexion client-export priority-1-low server
- 0
updated Nov 29, 2016
cette page html est auto-contenue (css)

#1358 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go client-export priority-5-today sub
- CLOSED
- 0
updated Nov 29, 2016
export ouvre un nouvel onglet, page html avec le rapport

#1357 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go client-export priority-5-today sub
- CLOSED
- 0
updated Nov 29, 2016
export html: Transformer l'export pdf en export html

#1356 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go client-export priority-5-today
- CLOSED
- 0
updated Nov 29, 2016
Axes lors de la normalisation

#1355 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug *-go client-normalization priority-4-week
- CLOSED
- 0
updated Apr 03, 2017
Upload de plus de 2G impossible

#1354 · opened Nov 29, 2016 by Vidjil Team old_tracker priority-2 server server-upload
- CLOSED
- 0
updated Nov 29, 2016
algo: minor release 2014.12

#1353 · opened Nov 29, 2016 by Vidjil Team old_tracker priority-5-today
- CLOSED
- 0
updated Nov 29, 2016
export html: diagnostic

#1352 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go LIL-Lille PAN-Necker client-export priority-5-today
- CLOSED
- 0
updated Nov 29, 2016
API: le analysis=xxxx ne fonctionne pas

#1350 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug *-go priority-5-today repseq-Nikos server-api
- CLOSED
- 0
updated Nov 29, 2016
Point non montré

#1349 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug client priority-4-week server server-fuse
- CLOSED
- 0
updated Nov 29, 2016
L'onglet "users" ne fonctionne plus sur rbx

#1347 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug priority-4-week server-admin
- CLOSED
- 0
updated Nov 29, 2016
Antonin : retravailler et faire marcher le graphe

#1346 · opened Nov 29, 2016 by Vidjil Team old_tracker !-hard client-grid priority-2
- 0
updated Nov 29, 2016
(Check commit) Pas de droits pour le groupe par défaut

#1343 · opened Nov 29, 2016 by Vidjil Team old_tracker !-security #-privacy *-go priority-5-today
- CLOSED
- 0
updated Nov 29, 2016
Anonymisation : quand un patient est créé, l'uploader doit avoir le droit "anon"

#1342 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug #-privacy *-go priority-4-week
- CLOSED
- 0
updated Nov 29, 2016
Afficher le nom (anonymisé) du patient dans les dialogues "delete patient" et "permission"

#1341 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go priority-2
- CLOSED
- 0
updated Nov 29, 2016
Après un cache-cache, les clones peuvent devenir obèses

#1340 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug *-go client-grid priority-3-month
- CLOSED
- 0
updated Nov 29, 2016
noms des fichiers .data et .analysis exportés

#1338 · opened Nov 29, 2016 by Vidjil Team old_tracker #-privacy *-go priority-1-low sub
- CLOSED
- 0
updated Feb 01, 2017
nom du fichier .csv

#1337 · opened Nov 29, 2016 by Vidjil Team old_tracker #-privacy *-go priority-1-low sub
- CLOSED
- 0
updated Feb 01, 2017
(et le backdoor du search, mais ok)

#1336 · opened Nov 29, 2016 by Vidjil Team old_tracker #-privacy *-go priority-1-low sub
- CLOSED
- 1
updated Feb 01, 2017
export pdf

#1335 · opened Nov 29, 2016 by Vidjil Team old_tracker #-privacy *-go priority-1-low sub
- CLOSED
- 1
updated Feb 01, 2017
page des fichiers fasta d'un patient

#1334 · opened Nov 29, 2016 by Vidjil Team old_tracker #-privacy *-go priority-1-low sub
- CLOSED
- 0
updated Feb 01, 2017
nom du patient transféré dans le .analysis (et affiché dans le info)

#1333 · opened Nov 29, 2016 by Vidjil Team old_tracker #-privacy *-go priority-1-low sub
- CLOSED
- 0
updated Feb 01, 2017
Anonymisation : il reste quelques endroits en clair

#1332 · opened Nov 29, 2016 by Vidjil Team old_tracker #-privacy *-go priority-1-low
- CLOSED
- 1
updated May 26, 2020
Faire passer les tests watir

#1331 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug *-go client dev-ci dev-tests dev-tests-watir priority-5-today
- CLOSED
- 0
updated Nov 18, 2017
Tri aussi par ordre décroissant

#1330 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go client-database client-ergonomy priority-2
- CLOSED
- 0
updated Nov 29, 2016
En cas d'absence de fichier de config, la fenêtre de bienvenue ne s'affiche pas.

#1329 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug *-go client priority-4-week
- CLOSED
- 0
updated Nov 29, 2016
Que devrait indiquer le menu "analysis" tout comme les #visu.axis_select pour des systèmes bizarres ?

#1328 · opened Nov 29, 2016 by Vidjil Team old_tracker !-reflexion bio-germlines priority-1-low
- 0
updated Nov 29, 2016
À l'ouverture d'un patient, sélectionner un bon système

#1327 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go bio-germlines client priority-2
- CLOSED
- 0
updated Nov 29, 2016
Stats sur clones sélectionnés : position

#1326 · opened Nov 29, 2016 by Vidjil Team old_tracker !-reflexion client-ergonomy client-less-css priority-1-low
- 0
updated Nov 29, 2016
Est-ce que toutes les classes CSS sont utilisées ?

#1325 · opened Nov 29, 2016 by Vidjil Team old_tracker client-less-css dev-policy priority-1-low
- 0
updated Nov 29, 2016
mise au point

#1324 · opened Nov 29, 2016 by Vidjil Team old_tracker !-hard !-important !-reflexion cpp-cluster feature priority-2 sub
- CLOSED
- 0
updated Feb 01, 2017
fuse

#1323 · opened Nov 29, 2016 by Vidjil Team old_tracker !-hard !-important !-reflexion cpp-cluster feature priority-2 sub
- CLOSED
- 0
updated Nov 20, 2018
Mettre au point le clustering automatique

#1322 · opened Nov 29, 2016 by Vidjil Team old_tracker !-hard !-important !-reflexion cpp-cluster feature priority-2
- 1
updated Apr 17, 2019
Permissions et groupes

#1321 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug priority-4-week server-database server-groups
- CLOSED
- 0
updated Jan 31, 2017
Tooltip sur 'e', 'X' et autres éléments

#1320 · opened Nov 29, 2016 by Vidjil Team old_tracker client client-ergonomy priority-1-low
- 0
updated Aug 23, 2017
Barre de progression lors de l'upload d'un fichier patient

#1319 · opened Nov 29, 2016 by Vidjil Team old_tracker !-hard client-ergonomy priority-3-month server-upload
- CLOSED
- 0
updated Nov 29, 2016
CSS : uniformiser les parties à mettre en couleur

#1318 · opened Nov 29, 2016 by Vidjil Team old_tracker *-too-vague client client-less-css dev-policy priority-1-low
- 0
updated Nov 29, 2016
clones

#1317 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go bio-germlines client-grid priority-3-month sub
- CLOSED
- 0
updated Nov 29, 2016
sp_system

#1316 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go bio-germlines client-grid priority-3-month sub
- CLOSED
- 0
updated Nov 29, 2016
Lorsqu'un système est caché, son sp_system doit rester au même endroit mais invisible, idem pour ses clones

#1315 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go bio-germlines client-grid priority-3-month
- CLOSED
- 0
updated Nov 29, 2016
admin: dans la table "user list", voir quelques détails

#1313 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go priority-1-low
- CLOSED
- 0
updated Nov 29, 2016
vérifier avec séquence Ja29 donnée par Aurélie

#1312 · opened Nov 29, 2016 by Vidjil Team old_tracker LIL-Lille bio-germlines dev-tests-notable priority-3-month sub
- CLOSED
- 0
updated Nov 22, 2017
compléter germline.cpp

#1311 · opened Nov 29, 2016 by Vidjil Team old_tracker LIL-Lille bio-germlines dev-tests-notable priority-3-month sub
- CLOSED
- 0
updated Nov 29, 2016
compléter germlines.data

#1310 · opened Nov 29, 2016 by Vidjil Team old_tracker LIL-Lille bio-germlines dev-tests-notable priority-3-month sub
- CLOSED
- 0
updated Nov 29, 2016
LEG: Vd2Ja29

#1309 · opened Nov 29, 2016 by Vidjil Team old_tracker LIL-Lille bio-germlines dev-tests-notable priority-3-month
- CLOSED
- 0
updated Nov 29, 2016
Anonymisation des données 'cheap', côté client

#1308 · opened Nov 29, 2016 by Vidjil Team old_tracker #-privacy *-go client client-ergonomy priority-4-week
- CLOSED
- 0
updated Nov 29, 2016
Alignement : la séquence majoritaire n'est plus la première affichée

#1306 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug *-go client-aligner priority-4-week
- CLOSED
- 0
updated Nov 29, 2016
Sauvegarde impossible du fichier analysis

#1305 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug *-go client-database priority-5-today server
- CLOSED
- 0
updated Nov 29, 2016
Réarrangements incomplets

#1304 · opened Nov 29, 2016 by Vidjil Team old_tracker LIL-Lille bio-germlines cpp-heuristic priority-5-today
- CLOSED
- 0
updated Nov 29, 2016
Éléments qui bougent suite à une normalisation

#1303 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go client-graph client-normalization client-ugly priority-3-month
- CLOSED
- 0
updated Apr 03, 2017
Bouton de normalisation non cohérent avec l'affichage dans le graphique

#1302 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug *-go client client-normalization priority-2
- CLOSED
- 0
updated May 11, 2017
Petits clones qui frétillent

#1300 · opened Nov 29, 2016 by Vidjil Team old_tracker client-grid client-ugly priority-1-low
- CLOSED
- 0
updated Nov 29, 2016
Liens mal placés pour le téléchargement des data et analysis

#1299 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go client-database client-ergonomy priority-2
- CLOSED
- 0
updated Nov 29, 2016
Ne pas faire apparaître les points qui n'ont pas fini de tourner

#1297 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug *-go client client-graph priority-2 server-database
- CLOSED
- 0
updated Nov 29, 2016
Fichiers SRA

#1296 · opened Nov 29, 2016 by Vidjil Team old_tracker priority-3-month
- CLOSED
- 0
updated Nov 29, 2016
Gros clones au milieu

#1295 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go LIL-Lille client-grid client-ugly priority-3-month
- CLOSED
- 0
updated Nov 21, 2017
Animations superflues lors de la normalisation

#1293 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go client-graph client-normalization client-ugly priority-3-month
- CLOSED
- 0
updated Apr 03, 2017
Nom de chaque sample : dans la DB ?

#1291 · opened Nov 29, 2016 by Vidjil Team old_tracker !-reflexion client-graph priority-2 server-database
- 0
updated Nov 29, 2016
Impossible de « décacher » le menu de gauche

#1289 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug *-go client-cloneList priority-3-month
- CLOSED
- 0
updated Nov 29, 2016
color by abundance at selected time point à l'intérieur d'un cluster

#1288 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug *-go client priority-2
- CLOSED
- 0
updated Nov 29, 2016
Stocker la taille des fichiers fasta comme entier

#1287 · opened Nov 29, 2016 by Vidjil Team old_tracker priority-2 server-database
- CLOSED
- 0
updated Nov 29, 2016
TCRKlass

#1286 · opened Nov 29, 2016 by Vidjil Team old_tracker #-aap-ADT-Inria feature priority-2 repseq-community
- 0
updated Nov 29, 2016
Ascenseur curieux qui fait partir le menu du haut

#1285 · opened Nov 29, 2016 by Vidjil Team old_tracker client client-less-css
- 0
updated Oct 18, 2018
Le renommage de clone ne fonctionne plus

#1282 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug *-go client-cloneList priority-3-month
- CLOSED
- 0
updated Nov 29, 2016
algo: Release 2014-11, gzip, premier multi-système fonctionnel

#1280 · opened Nov 29, 2016 by Vidjil Team old_tracker bio-germlines priority-4-week
- CLOSED
- 0
updated Nov 29, 2016
Stocker chez nous le fichier d'IMGT et tests

#1279 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go bio-germlines dev-ci dev-tests priority-4-week
- CLOSED
- 0
updated Nov 29, 2016
Database Timeout

#1278 · opened Nov 29, 2016 by Vidjil Team old_tracker client-database dev-robust priority-3-month server-speed
- CLOSED
- 0
updated Nov 24, 2017
Avoir un indicateur persistant qui tourne/bouge quand un upload est en cours

#1277 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go client-database client-ergonomy priority-3-month server-upload
- CLOSED
- 0
updated Nov 29, 2016
Supprimer le champ DB 'germline'

#1276 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go priority-3-month server-database
- CLOSED
- 0
updated Nov 29, 2016
On ne peut plus visualiser la séquence de clones "?/?"

#1275 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug client-aligner priority-3-month
- CLOSED
- 0
updated Nov 29, 2016
send to IMGT: ne marche plus

#1274 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug priority-5-today
- CLOSED
- 0
updated Nov 29, 2016
Algo multi-système 1.9, faire passer les tests, k-mers ambigus

#1272 · opened Nov 29, 2016 by Vidjil Team old_tracker bio-germlines cpp-heuristic dev-tests priority-4-week
- CLOSED
- 0
updated Nov 29, 2016
Clavier : une touche pour changer de système (syst. incomplets)

#1271 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go client-keyboard priority-2
- CLOSED
- 0
updated Nov 29, 2016
Moins de rebond lors du changement de système

#1270 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go client client-grid priority-2
- CLOSED
- 0
updated Nov 29, 2016
Lien direct pour visualiser les courbes d'un patient

#1269 · opened Nov 29, 2016 by Vidjil Team old_tracker *-go client-ergonomy feature priority-4-week server-database
- CLOSED
- 0
updated Nov 29, 2016
Listes de gauches montrées même vides

#1268 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug *-go client-cloneList priority-4-week
- CLOSED
- 0
updated Nov 29, 2016
Capture un peu trop large des raccourcis clavier

#1267 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug *-go client priority-4-week
- CLOSED
- 0
updated Nov 29, 2016
Erreur d'affectation en multi-système

#1265 · opened Nov 29, 2016 by Vidjil Team old_tracker !!-bug *-go bio-germlines cpp-heuristic priority-3-month
- CLOSED
- 0
updated Nov 29, 2016