Skip to content

GitLab

  • Projects
  • Groups
  • Snippets
  • Help
    • Loading...
  • Help
    • Help
    • Support
    • Community forum
    • Submit feedback
    • Contribute to GitLab
  • Sign in
vidjil
vidjil
  • Project overview
    • Project overview
    • Details
    • Activity
    • Releases
  • Repository
    • Repository
    • Files
    • Commits
    • Branches
    • Tags
    • Contributors
    • Graph
    • Compare
  • Issues 1,712
    • Issues 1,712
    • List
    • Boards
    • Labels
    • Service Desk
    • Milestones
  • Merge Requests 87
    • Merge Requests 87
  • CI / CD
    • CI / CD
    • Pipelines
    • Jobs
    • Schedules
  • Operations
    • Operations
    • Incidents
    • Environments
  • Packages & Registries
    • Packages & Registries
    • Container Registry
  • Analytics
    • Analytics
    • CI / CD
    • Repository
    • Value Stream
  • Snippets
    • Snippets
  • Members
    • Members
  • Collapse sidebar
  • Activity
  • Graph
  • Create a new issue
  • Jobs
  • Commits
  • Issue Boards
  • vidjil
  • vidjilvidjil
  • Issues
  • #3950

Closed
Open
Opened Jul 10, 2019 by Mikaël Salson@mikael-sOwner

Parser de résultats d'IgReC

Pour vdj#26.

Exemple de sortie du fichier alignment_info.csv :

antibody_3997:TRBV13_02;TRBD1_01;TRBJ1-5_01_4126_9_258_1:0:0_0:0:0_1/1  TRB     TRBV13*02       1       164     0.58156 TRBJ1-5*01      319     367     0.94
antibody_3997:TRBV13_02;TRBD1_01;TRBJ1-5_01_4126_7_256_0:0:0_0:0:0_2/1  TRB     TRBV13*02       1       166     0.588652        TRBJ1-5*01      319     367     0.9

Les séparateurs de champs sont des tabulations (le premier champ n'est que le nom du read).

To upload designs, you'll need to enable LFS and have an admin enable hashed storage. More information
Assignee
Assign to
None
Milestone
None
Assign milestone
Time tracking
None
Due date
None
Reference: vidjil/vidjil#3950