Skip to content

GitLab

  • Menu
Projects Groups Snippets
    • Loading...
  • Help
    • Help
    • Support
    • Community forum
    • Submit feedback
    • Contribute to GitLab
  • Sign in
  • vidjil vidjil
  • Project information
    • Project information
    • Activity
    • Labels
    • Members
  • Repository
    • Repository
    • Files
    • Commits
    • Branches
    • Tags
    • Contributors
    • Graph
    • Compare
  • Issues 1,698
    • Issues 1,698
    • List
    • Boards
    • Service Desk
    • Milestones
  • Merge requests 91
    • Merge requests 91
  • CI/CD
    • CI/CD
    • Pipelines
    • Jobs
    • Schedules
  • Deployments
    • Deployments
    • Environments
    • Releases
  • Monitor
    • Monitor
    • Incidents
  • Packages & Registries
    • Packages & Registries
    • Container Registry
  • Analytics
    • Analytics
    • Value stream
    • CI/CD
    • Repository
  • Snippets
    • Snippets
  • Activity
  • Graph
  • Create a new issue
  • Jobs
  • Commits
  • Issue Boards
Collapse sidebar
  • vidjil
  • vidjilvidjil
  • Issues
  • #1

Closed
Open
Created Nov 24, 2016 by Mathieu Giraud@magiraudOwner

Vidjil, an open-source platform for Repertoire Sequencing data

We develop an open-source platform for the interactive analysis of high-throughput sequencing data from lymphocyte recombinations (RepSeq). The Vidjil algorithm gathers reads into clonotypes according to their V(D)J junctions (#2 (closed)). The Vidjil web application contains a client enabling visualization and interaction with clonotypes populations (#3 (closed)) and a server launching RepSeq software on a sample, experiment and patient database (#4 (closed)). We design the web application to work in an open ecosystem of RepSeq software, exchanging data and services with other RepSeq software (#5 (closed)). We are agile (#6 (closed)).

To upload designs, you'll need to enable LFS and have an admin enable hashed storage. More information
Assignee
Assign to
Time tracking