Vidjil, an open-source platform for Repertoire Sequencing data

We develop an open-source platform for the interactive analysis of high-throughput sequencing data from lymphocyte recombinations (RepSeq). The Vidjil algorithm gathers reads into clonotypes according to their V(D)J junctions (#2 (closed)). The Vidjil web application contains a client enabling visualization and interaction with clonotypes populations (#3 (closed)) and a server launching RepSeq software on a sample, experiment and patient database (#4 (closed)). We design the web application to work in an open ecosystem of RepSeq software, exchanging data and services with other RepSeq software (#5 (closed)). We are agile (#6 (closed)).