Once germline.js is loaded we can load the remainder. Otherwise
germline_builder.js could be loaded before germline.js finished loading which
caused germline_builder to complain because it didn't know the variable
germline_data

This commit just moved lines and reindented them.

make browser (for instance) could not have been launched because the directory
browser existed.

Added an error message when editing a file if the user doesn't specify a
patient, run or sample set to associate the file to.

934fb10c answers the question in daec6797. Therefore the try/except construction
is not useful anymore (even as a memory).

When VDJ positions cannot be determined because of a lack of information in the
original file, the function just returns a None.

Fix #2089

The configs added by the init_db function were missing some values, and
could therefore not be used 'out of the box'.
This should resolve the issue and move us closer to a 'plug and play'
situation with our chosen installation methods

In the debian packages all git revision information has been removed.
Therefore, for the time being we will simply display 'not versioned' if
git res-parse HEAD causes an exception

Streamlines things before thinking seriously to #1471.

Master is our stable branch.

Fixes 2f117f42

See 2f117f42

This follows a suggestion by @magiraud in #2085 about
the usefulness of hasSeg.
Now hasSeg is used to reduce the code written, enhance the
readability and minimize my cognitive dissonance (see c97705f9).

Closes #2085.

At the moment I don't see a good reason for ignoring exceptions.
As this is not explained, I prefer removing this behaviour.
If it appears necessary to put it back, that should be clearly explained.

Lack of this argument created a problem when accessing it.

According to our format, sequence is not in the seg field.

js/model_loader.js show sample information

modify model loader to show sample information when a local file is download, by @aurelBZH 

@magiraud @RyanHerb

See merge request !2

modify model loader to show sample information when a local file is download

Most of the time, it is now the most important group and the place
to check or update the permissions.

Fix #2077.

Regular support is currently done by @flothoni (fr), @mikael-s and @magiraud (en).