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clarity !

See #3041

mostly a failsafe in case of bad data. In a normal environment this
should not matter.

See #3041

instead of having one button per config, just a single button that
extracts for all configs should suffice.

See #3041

if config is not selected then send all results_files

See #3041

See #3041

view was erroneously left out.

allows tags to redirect to the stats page from the stats page

an export button for each config for which the sample_set contains a
result.

when clicking the stats link conserve the filter applied to the
sample_set list.

adds a simple sample_set_list that the user can select in order to
export all results_files for a given config that are associated to the
selected sample_sets.
The files are stored in a zip file along with a json file containing
some metadata.

We want to build a modular search string so we can have a reduced list
of columns.

controllers/sample_set.py, modules/vidjil_utils.py: extracts stats() from old patient.stats() controller

Work in progress.
See #3041.

See #2960, #3051.

Closes #3051.

Hotfix c/3043 load custom germline

See merge request !153

link to #3043

See vdj#603.

See vdj#603.

link to #3043

Useful on CI as well as on CI mails.

Thanks to @mikael-s.

Reindent: Make the code more readable

See merge request !151

Cleaning some clustering aspects

See merge request !152

See #3033.

Closes #3033.

Now on should-get tests.
See #3033.

Give more auth information in the logs (for user/group creation/modification), and for the request analysis email.

Closes #2960

See merge request !143

See #3036.

Testing things in germlines (purposedly without md5).
See #3036.

J downstream sequences should also be gapped.
See #3002.