1. 27 Nov, 2017 5 commits
  2. 21 Nov, 2017 1 commit
  3. 31 Oct, 2017 1 commit
  4. 18 Oct, 2017 1 commit
  5. 17 Sep, 2017 2 commits
  6. 15 Sep, 2017 6 commits
  7. 14 Sep, 2017 1 commit
    • Mikaël Salson's avatar
      vidjil-error-incorrect-germlines.should-get: Other error message · fa27ae7d
      Mikaël Salson authored
      With the newer JSON library the launched exception seems to be different.
      However the current error (“cannot properly read”) is more meaningful than the
      previous one (“cannot open .g file”). Therefore we prefer this new error
      message and we don't change the exception catching in germline.cpp.
      fa27ae7d
  8. 13 Sep, 2017 2 commits
  9. 04 Sep, 2017 1 commit
  10. 28 Aug, 2017 6 commits
  11. 07 Jul, 2017 4 commits
  12. 23 Mar, 2017 3 commits
  13. 17 Mar, 2017 1 commit
    • Mikaël Salson's avatar
      Makefile: Improve test speeds · 53be475d
      Mikaël Salson authored
      Tests were launched with -O0 option to make debugging easier, in particular
      with gdb but also possibly with Valgrind. However this induces a large time
      penaly. As we want to improve test speeds (#2254), it should be a good idea to
      use -O2.
      
      Note that we do not compile with -DNDEBUG, which would improve speed test only
      slightly. It is important that assertions are tested. Unit and functional
      tests are the perfect place for that.
      53be475d
  14. 16 Mar, 2017 5 commits
  15. 14 Mar, 2017 1 commit
    • Mikaël Salson's avatar
      segmentation-D-read-number.should-get: simplify the test · 9f954b66
      Mikaël Salson authored
      Why can't we keep complicated stuff when there exists really easy solutions?
      
      The purpose is to test consistency of the segmentation with 1, 6 and 11 reads.
      Instead of generating the data on the fly we can store the most abundant datasets
      and use the magic -x option (see 7b314b61) to restrict the dataset to fewer
      sequences.
      
      This will solve some compatibility issues as this test could have some troubles
      working on some architectures.
      9f954b66