- 11 Mar, 2015 36 commits
-
-
Mathieu Giraud authored
This should change nothing, we should never go to the '?'.
-
Mathieu Giraud authored
As noted by @mikael-s, e963e165 hided a failed test in vidjil_revcomp_s22.should_get. This test is one challenging sequence from Stanford-S22: we currently do not find the same window on the sequence and on its revcomp.
-
Mikaël Salson authored
-
Mikaël Salson authored
valgrind_should: valgrind on functional tests valgrind_tests: valgrind on unit tests
-
Mathieu Giraud authored
-
-
Marc Duez authored
pip install unittest2 pip install unittest-xml-reporting python web2py.py -S vidjil -M -R testRunner.py output folder > server/web2py/test-reports
-
Marc Duez authored
-
Marc Duez authored
-
Marc Duez authored
-
Marc Duez authored
-
Marc Duez authored
-
Marc Duez authored
-
Mathieu Giraud authored
This test was too long. We now just check the first 1000 reads and the main clone.
-
Mathieu Giraud authored
This invocation should also be more portable See http://stackoverflow.com/questions/2792675/how-portable-is-mktemp1
-
Mikaël Salson authored
-
Mikaël Salson authored
-
Mikaël Salson authored
-
-
Mikaël Salson authored
By default the launcher is put at the start of the command line. In some cases it must not be at the start and in other cases we don't want to use valgrind (or another launcher) so we deactivate it with the !NO_LAUNCHER: directive
-
Mikaël Salson authored
If we find it, we don't add it at the beginning (see doc.)
-
Mikaël Salson authored
Makefile: For tests ensure that vidjil is rebuilt with -O0 -g so that we get useful information with Valgrind (slower...)
-
Mikaël Salson authored
-
Mikaël Salson authored
Use " rather than ' so that LAUNCHER can be expanded which is useful when LAUNCHER contains some bash commands.
-
Mikaël Salson authored
This allows to launch the script from another directory while still benefiting from the default otions -p and -q.
-
Mikaël Salson authored
-
Mikaël Salson authored
If we overwrite the_kseg (in case it exists), it is definitely lost and we have a memory leak.
-
Mikaël Salson authored
-
Mathieu Giraud authored
-
Mathieu Giraud authored
-
Mathieu Giraud authored
-
Mathieu Giraud authored
-
Mathieu Giraud authored
-
Mathieu Giraud authored
-
Mathieu Giraud authored
-
Tatiana Rocher authored
-
- 10 Mar, 2015 4 commits
-
-
Mathieu Giraud authored
-
Mathieu Giraud authored
-
Mathieu Giraud authored
We do not want to have red everywhere in the default view.
-
Mathieu Giraud authored
-