1. 16 Dec, 2014 1 commit
  2. 03 Dec, 2014 2 commits
  3. 22 Nov, 2014 2 commits
  4. 21 Nov, 2014 2 commits
  5. 01 Nov, 2014 1 commit
  6. 23 Oct, 2014 1 commit
  7. 20 Oct, 2014 3 commits
  8. 14 Oct, 2014 1 commit
  9. 07 Oct, 2014 1 commit
  10. 03 Oct, 2014 1 commit
  11. 02 Oct, 2014 1 commit
  12. 01 Oct, 2014 3 commits
  13. 23 Sep, 2014 2 commits
  14. 08 Aug, 2014 1 commit
  15. 11 Jul, 2014 1 commit
  16. 07 Jul, 2014 2 commits
  17. 02 Jul, 2014 1 commit
    • Mikaël Salson's avatar
      Segment: Initialization missing. · f541ea0c
      Mikaël Salson authored
      When the sequence was not segmented, the reversed variable was not initialized.
      Then it was used in some functions, but without huge consequences…
      f541ea0c
  18. 16 May, 2014 1 commit
  19. 15 Apr, 2014 2 commits
  20. 14 Apr, 2014 1 commit
  21. 27 Mar, 2014 2 commits
  22. 20 Feb, 2014 1 commit
    • Mathieu Giraud's avatar
      Vidjil: release 2014.02 · 113ee8ee
      Mathieu Giraud authored
      	* Refactored main vidjil.cpp (core/windows.cpp, core/windowExtractor.cpp)
      	* Removed unused html output
      	* Better json output (core/json.cpp)
      	* Updated main stdout, with representative sequence for each clone
      	* Updated parameters for FineSegmenter (delta_max) and dynprog (substition cost)
      	* Bugs closed
      113ee8ee
  23. 07 Oct, 2013 1 commit
    • Mikaël Salson's avatar
      Vidjil: release 2013.10 · 2cbd3725
      Mikaël Salson authored
      	* Better heuristic, segments more reads (core/segment.cpp)
      	* Better and faster selection of representative read (vidjil.cpp, core/read_chooser.cpp)
      	* Better display of reason of non-segmenting reads
      	* New normalization against a standard (-Z) (core/labels.cpp)
      	* New experimental lazy_msa multiple aligner
      	* New .json output
      	* New unit tests
      	* Bugs closed
      2cbd3725
  24. 03 Jul, 2013 1 commit
    • Mathieu Giraud's avatar
      Vidjil: release 2013.07 · de4c48e0
      Mathieu Giraud authored
      	* New selection of representative read (core/read_chooser.cpp)
      	* Faster spaced seed computation (core/tools.cpp)
      	* New unit tests
      	* Bugs closed
      de4c48e0
  25. 26 Apr, 2013 1 commit