Corrects a bug where nothing opens.

Conflicts:
	server/web2py/applications/vidjil/controllers/default.py

debug: original name order

Yes, we get rid of a very old duplicate in the code...

Again, the goal is to remove very_detailed_cluster_analysis.

This feature was seldom used.

The goal is to completely remove the 'very_detailed_cluster_analysis' phase,
in order to have a cleaner and more maintenable code, before attempting
a modularization of vidjil.cpp.

This feature was seldom used.
Now we have the browser: It could show a distance graph in a next future.

This code was wrote a long time ago and is not used anymore.
Now we have the browser to visualize alignments.

Additionaly, use everywhere 'clustering' instead of 'clusteri[sz]ation'

To actually output 'out/seq/sequences.fa-*', we need to run this somewhat old code

Vidjil is open-source, made with heart, but comes with no warranty ;-)

logs and sends email... now we need to make it work from routes.py

Before, it was evaluated once at logger creation.

Mathieu Giraud authored Sep 25, 2014 and Vidjil Team committed Sep 25, 2014

This should rather be in 'modules/', but I don't manage to get the 'import' working

TODO/BUG : sort is done against current germline, so for multi-system only one system is sorted

No reason to require that the cgi_address is set to use the DB_ADDRESS.