- 07 May, 2020 1 commit
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Mikaël Salson authored
doc/.gitlab-ci.yml: build doc with Docker, also on 'feature-a/release' branches See merge request !680
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- 04 May, 2020 1 commit
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Mikaël Salson authored
vidjil-algo: release 2020.05 See merge request !683
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- 01 May, 2020 4 commits
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Mathieu Giraud authored
see #4278
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Mathieu Giraud authored
see #4274
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Mathieu Giraud authored
follows 13501a70
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Mathieu Giraud authored
Correct trimSequence Closes #4272 See merge request !681
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- 30 Apr, 2020 3 commits
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Mikaël Salson authored
Bug remained in some cases because of a poor initial test case Fix #4272 (and #4263)
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Mathieu Giraud authored
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Mathieu Giraud authored
Feature a/docker benchmark See merge request !678
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- 29 Apr, 2020 5 commits
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Mikaël Salson authored
vidjil-algo: release 2020.04 See merge request !674
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Mikaël Salson authored
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Mikaël Salson authored
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Mikaël Salson authored
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Mathieu Giraud authored
see #4268
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- 28 Apr, 2020 22 commits
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If we try to set the same index several times we will wrongly have several references to it and, thus, will never be deleted, which Valgrind dislikes See !674
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Mathieu Giraud authored
see #4268
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Mathieu Giraud authored
Feature a/small fixes See merge request !677
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Mikaël Salson authored
--gz makes also output .vdj.fa.gz Closes #4270 See merge request !676
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Mikaël Salson authored
Reset the seed to have the same conditions. Otherwise depending on the number of tests and the number of times the pseudo-random generator has been used the test may fail or succeed (we are using a RandomScore now)
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Mikaël Salson authored
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Mikaël Salson authored
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Mikaël Salson authored
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Mikaël Salson authored
We didn't take into account the length (as it was added later). This is now fixed.
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Mathieu Giraud authored
closes #4270
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Mathieu Giraud authored
see #4270
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Mathieu Giraud authored
opens #4270
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Mikaël Salson authored
--gz makes also output AIRR .tsv.gz Closes #4249 See merge request !675
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Mathieu Giraud authored
Our main file is .vijdil, and not anymore .vdj.fa (for ages)
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Mathieu Giraud authored
closes #4249
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Mathieu Giraud authored
see #4269
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Mathieu Giraud authored
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Mathieu Giraud authored
opens #4269
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Mikaël Salson authored
Fix algo with N in window Closes #4263 See merge request !672
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Mikaël Salson authored
For some reason it was failing with my g++-5
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Mikaël Salson authored
As trimSequence is used on a representative and as the representative should contain the window we now make sure that the window is not trimmed. Fix #4263
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Mikaël Salson authored
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- 24 Apr, 2020 1 commit
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Mathieu Giraud authored
No more need to launch scripts from scripts directory See merge request !670
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- 23 Apr, 2020 3 commits
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Mikaël Salson authored
vidjil-algo: new option --gz to output .vidjil.gz Closes #4253 See merge request !667
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Mathieu Giraud authored
Docker emails Closes #2760 See merge request !666
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server/web2py/applications/vidjil/scripts/*.sh: No more need to launch scripts from the scripts/ directory Now we can launch the script from anywhere. With Docker we can even launch a script from the host using docker exec.
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