- 07 May, 2020 1 commit
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Mikaël Salson authored
doc/.gitlab-ci.yml: build doc with Docker, also on 'feature-a/release' branches See merge request !680
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- 04 May, 2020 1 commit
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Mikaël Salson authored
vidjil-algo: release 2020.05 See merge request !683
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- 01 May, 2020 4 commits
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Mathieu Giraud authored
see #4278
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Mathieu Giraud authored
see #4274
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Mathieu Giraud authored
follows 13501a70
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Mathieu Giraud authored
Correct trimSequence Closes #4272 See merge request !681
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- 30 Apr, 2020 3 commits
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Mikaël Salson authored
Bug remained in some cases because of a poor initial test case Fix #4272 (and #4263)
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Mathieu Giraud authored
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Mathieu Giraud authored
Feature a/docker benchmark See merge request !678
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- 29 Apr, 2020 5 commits
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Mikaël Salson authored
vidjil-algo: release 2020.04 See merge request !674
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Mikaël Salson authored
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Mikaël Salson authored
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Mikaël Salson authored
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Mathieu Giraud authored
see #4268
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- 28 Apr, 2020 22 commits
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Mikaël Salson authored
If we try to set the same index several times we will wrongly have several references to it and, thus, will never be deleted, which Valgrind dislikes See !674
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Mathieu Giraud authored
see #4268
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Mathieu Giraud authored
Feature a/small fixes See merge request !677
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Mikaël Salson authored
--gz makes also output .vdj.fa.gz Closes #4270 See merge request !676
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Mikaël Salson authored
Reset the seed to have the same conditions. Otherwise depending on the number of tests and the number of times the pseudo-random generator has been used the test may fail or succeed (we are using a RandomScore now)
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Mikaël Salson authored
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Mikaël Salson authored
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Mikaël Salson authored
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Mikaël Salson authored
We didn't take into account the length (as it was added later). This is now fixed.
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Mathieu Giraud authored
closes #4270
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Mathieu Giraud authored
see #4270
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Mathieu Giraud authored
opens #4270
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Mikaël Salson authored
--gz makes also output AIRR .tsv.gz Closes #4249 See merge request !675
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Mathieu Giraud authored
Our main file is .vijdil, and not anymore .vdj.fa (for ages)
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Mathieu Giraud authored
closes #4249
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Mathieu Giraud authored
see #4269
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Mathieu Giraud authored
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Mathieu Giraud authored
opens #4269
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Mikaël Salson authored
Fix algo with N in window Closes #4263 See merge request !672
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Mikaël Salson authored
For some reason it was failing with my g++-5
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Mikaël Salson authored
As trimSequence is used on a representative and as the representative should contain the window we now make sure that the window is not trimmed. Fix #4263
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Mikaël Salson authored
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- 24 Apr, 2020 1 commit
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Mathieu Giraud authored
No more need to launch scripts from scripts directory See merge request !670
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- 23 Apr, 2020 3 commits
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Mikaël Salson authored
vidjil-algo: new option --gz to output .vidjil.gz Closes #4253 See merge request !667
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Mathieu Giraud authored
Docker emails Closes #2760 See merge request !666
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Mikaël Salson authored
server/web2py/applications/vidjil/scripts/*.sh: No more need to launch scripts from the scripts/ directory Now we can launch the script from anywhere. With Docker we can even launch a script from the host using docker exec.
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