1. 01 Apr, 2021 1 commit
  2. 19 Apr, 2019 2 commits
  3. 18 Apr, 2019 1 commit
  4. 08 Mar, 2019 1 commit
    • Mathieu Giraud's avatar
      tests: update · 2900822b
      Mathieu Giraud authored
      Use the new option names.
      Remove also '--trim 0' options used in some tests.
      
      See #3295.
      2900822b
  5. 29 Jan, 2018 2 commits
  6. 10 Jan, 2018 1 commit
  7. 15 Sep, 2017 1 commit
  8. 01 Feb, 2017 2 commits
  9. 31 Jan, 2017 1 commit
  10. 13 Jul, 2016 1 commit
  11. 01 Mar, 2016 2 commits
  12. 19 Feb, 2016 1 commit
  13. 28 May, 2015 1 commit
  14. 17 Apr, 2015 1 commit
  15. 25 Nov, 2014 1 commit
  16. 10 Oct, 2014 1 commit
  17. 02 Oct, 2014 2 commits
  18. 01 Apr, 2014 1 commit
  19. 20 Feb, 2014 1 commit
    • Mathieu Giraud's avatar
      Vidjil: release 2014.02 · 113ee8ee
      Mathieu Giraud authored
      	* Refactored main vidjil.cpp (core/windows.cpp, core/windowExtractor.cpp)
      	* Removed unused html output
      	* Better json output (core/json.cpp)
      	* Updated main stdout, with representative sequence for each clone
      	* Updated parameters for FineSegmenter (delta_max) and dynprog (substition cost)
      	* Bugs closed
      113ee8ee
  20. 07 Oct, 2013 1 commit
    • Mikaël Salson's avatar
      Vidjil: release 2013.10 · 2cbd3725
      Mikaël Salson authored
      	* Better heuristic, segments more reads (core/segment.cpp)
      	* Better and faster selection of representative read (vidjil.cpp, core/read_chooser.cpp)
      	* Better display of reason of non-segmenting reads
      	* New normalization against a standard (-Z) (core/labels.cpp)
      	* New experimental lazy_msa multiple aligner
      	* New .json output
      	* New unit tests
      	* Bugs closed
      2cbd3725
  21. 03 Jul, 2013 1 commit
    • Mathieu Giraud's avatar
      Vidjil: release 2013.07 · de4c48e0
      Mathieu Giraud authored
      	* New selection of representative read (core/read_chooser.cpp)
      	* Faster spaced seed computation (core/tools.cpp)
      	* New unit tests
      	* Bugs closed
      de4c48e0
  22. 26 Apr, 2013 1 commit