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Mikaël Salson authored Aug 23, 2016 and Mathieu Giraud committed Sep 23, 2016

The field searched for are not the same anymore, so we adapt the tests.

Mikaël Salson authored Aug 23, 2016 and Mathieu Giraud committed Sep 23, 2016

Will be useful for the clone DB

Mikaël Salson authored Aug 18, 2016 and Mathieu Giraud committed Sep 23, 2016

In this case sequences are longer, which is more interesting and IMGT provides
the start and stop positions, which is more robust.
Additionnally we also have access to all CDR and FR regions for the future.

Mikaël Salson authored Aug 18, 2016 and Mathieu Giraud committed Sep 23, 2016

The for-loop was useless. We start by defining the fields to be processed and then
for each of them we compute the start and stop positions.
We also take benefit of the fact that IMGT may define itself the start and stop positions
in which case we just retrieve them.

Mikaël Salson authored Aug 18, 2016 and Mathieu Giraud committed Sep 23, 2016

Proxy is now on rbx and not on dev anymore (for quite a long time actually).

HERBERT Ryan authored Aug 19, 2016 and Mathieu Giraud committed Sep 23, 2016

Resolved an issue where the permissions for viewing results logs were
checked on the wrong sample set

HERBERT Ryan authored Aug 19, 2016 and Mathieu Giraud committed Sep 23, 2016

Refactored the selection of the owner group when adding a patient and a
run since the process is the same, but there was a duplication in the
code and the two versions had diverged, creating a bug.

Mikaël Salson authored Aug 19, 2016 and Mathieu Giraud committed Sep 23, 2016

It avoids ambiguity and ensures that we redirect to the right page.

Mikaël Salson authored Aug 19, 2016 and Mathieu Giraud committed Sep 23, 2016

We can remove results file from a run that is
not linked in any way to a patient. We just
consider the sample set

marc authored Aug 16, 2016 and Mathieu Giraud committed Sep 22, 2016

improve loop

marc authored Aug 16, 2016 and Mathieu Giraud committed Sep 22, 2016

same as list.js

marc authored Aug 16, 2016 and Mathieu Giraud committed Sep 22, 2016

nodes start with size 0 (=>the scatterplot doesn't freeze anymore during the first frames)

marc authored Aug 16, 2016 and Mathieu Giraud committed Sep 22, 2016

remove some useless code

marc authored Aug 16, 2016 and Mathieu Giraud committed Sep 22, 2016

build everything once, update/hide/display if necessary

marc authored Aug 16, 2016 and Mathieu Giraud committed Sep 22, 2016

improve sortListByXXX functions
-add generic function sortListBy(fct)
-remove obsolete funtion
-use javascript to retrieve attribute instead of jquery

marc authored Aug 16, 2016 and Mathieu Giraud committed Sep 22, 2016

redraw lines only if neccessary

HERBERT Ryan authored Aug 17, 2016 and Mathieu Giraud committed Sep 22, 2016

This hotfix resolves an issue with default group selection when creating
a new patient.

This issue affected users that belonged to multiple groups but did not
have creation permissions on all groups.

The default user group is now also only displayed if the user has create
permissions on that group.

HERBERT Ryan authored Aug 11, 2016 and Mathieu Giraud committed Sep 22, 2016

Revamped the packaging information with new tools and techniques that
have come to light to my attention and make things easier

marc authored Aug 11, 2016 and Mathieu Giraud committed Sep 22, 2016

database.js / file controller : add a client side form validator for file upload (check the number of file provided/pre_process)

florian.thonier authored Aug 10, 2016 and Mathieu Giraud committed Sep 22, 2016

numerical field by 'val' key
textual field by 'info' key.

HERBERT Ryan authored Aug 08, 2016 and Mathieu Giraud committed Sep 22, 2016

Added an array of fields that should not be copied over to the model.
This is a quick fix rather than restructuring the whole json.

All our outputs are 1-based.

VJ/VDJ .fa headers with position lists are displayed through a more generic way,
also able to handle VDDJ or other things.