- 16 Jul, 2015 10 commits
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florian.thonier authored
list_test.js : new values after norm, due to new size of normalised clone (TRG smaller, half size than before)
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florian.thonier authored
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florian.thonier authored
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Tatiana Rocher authored
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Mathieu Giraud authored
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Mathieu Giraud authored
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Mathieu Giraud authored
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Mathieu Giraud authored
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Mikaël Salson authored
There is a button for normalizing external data and a button for normalizing clones. An ID is attributed to both of them. This fixes the browser functional testing
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Mikaël Salson authored
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- 15 Jul, 2015 1 commit
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Mathieu Giraud authored
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- 13 Jul, 2015 3 commits
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Mathieu Giraud authored
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Mathieu Giraud authored
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Mathieu Giraud authored
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- 10 Jul, 2015 11 commits
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Mathieu Giraud authored
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Mathieu Giraud authored
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Mathieu Giraud authored
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Mathieu Giraud authored
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Mathieu Giraud authored
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Mathieu Giraud authored
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Mathieu Giraud authored
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Mathieu Giraud authored
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Mathieu Giraud authored
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Mathieu Giraud authored
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Mathieu Giraud authored
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- 09 Jul, 2015 9 commits
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Mathieu Giraud authored
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Mathieu Giraud authored
We have several "'NoneType' object has no attribute 'status'" tickets on the server. We should investigate why info.html has sometimes no run to display.
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Mathieu Giraud authored
Log a specific error message when - 'db.sequence_file[request.vars["id"]]' is None - 'data_file' is not stored We have several errors on the server for these two points, we should investigate.
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Mathieu Giraud authored
Fix e9864cd4. The previous affectation was not cloning the system_selected array, giving strange things at the next change of system_selected. This bug surfaced only recently: a52634a2 uses toggle_system(true).
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Mikaël Salson authored
The function could not be properly tested because unit test cannot (in an easy way?) work on files stored by the DB. The get_analysis function has been split in several functions.
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Mikaël Salson authored
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Mikaël Salson authored
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Mikaël Salson authored
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Mikaël Salson authored
Fix b069b161
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- 03 Jul, 2015 6 commits
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Mathieu Giraud authored
We check that the score of the V/J regions is at least the one of 10 matches. This range of commits further prepares the code for an actual p-value computation.
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Mathieu Giraud authored
As the FineSegmenter does not accept too short 5/3 regions, the 'trd-dd2-dd3.fa' test becomes a '.should-locus' test: It is not tested for the FineSegmenter. It is replaced by this new test, that includes Dd2 upstream and Dd3 downstream regions.
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Mathieu Giraud authored
multi-tiny.fa is a shortened version of multi-short.fa, with only 10 bp at the end of V and at the start of J.
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Mathieu Giraud authored
This test checks the representative and should not be changed by the output of the FineSegmenter. We thus set '-z 0'.
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Mathieu Giraud authored
Waiting for a true p-value computation, we just require here that the score is at least the one of 10 matches.
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Mathieu Giraud authored
As the FineSegmenter include a (now fake) e-value computation, these e-values are on stdout. Two tests need to be updated.
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