- 10 Nov, 2014 2 commits
- 07 Nov, 2014 20 commits
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Marc Duez authored
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Mikaël Salson authored
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Mikaël Salson authored
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Mikaël Salson authored
Even if the CGI fails for an unknown reason we still have the content type, which should satisty the web server
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Mikaël Salson authored
I thought mkstemp would do that by itself. While it may seem not very satistfactory to hardcode the path, /tmp is POSIX.
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Marc Duez authored
pdf.js : debug default clone list for pdf > with multi-system the first 5 clone in the list can be unactive
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Marc Duez authored
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Mathieu Giraud authored
See 183ad875.
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Mathieu Giraud authored
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Mathieu Giraud authored
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Mathieu Giraud authored
This code was duplicated in 60a8bf4a.
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Mathieu Giraud authored
This test was already working, but threw an exception, and the test coverage could be ignored.
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Marc Duez authored
germline_builder : continue to build germline even if the system is not referenced in germlines.data (or if the browser can't access to germlines.data)
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Marc Duez authored
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Mathieu Giraud authored
Simplification of the code.
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Mathieu Giraud authored
Closes bug tested by 14b16e9c.
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Mathieu Giraud authored
Bug: With a reasonnably large -r option (such as 2000), no representative is found. This is because min_cover is larger than max_auditioned.
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Mathieu Giraud authored
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Mathieu Giraud authored
If -w is below the seed weight (hence the junction size), strange things may happen, as for example a clone without representative.
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- 06 Nov, 2014 18 commits
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Mathieu Giraud authored
Closes bug created by 59a1bcf6.
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Mathieu Giraud authored
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Mathieu Giraud authored
59a1bcf6 added some spurious output that breaks CGI. Thanks to @mikael-s for pointing that out.
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Mikaël Salson authored
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Marc Duez authored
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Marc Duez authored
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Marc Duez authored
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Marc Duez authored
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Marc Duez authored
fastaToJson.py : repair/update > python script, used to produce germline.js with fasta file from germline folder
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Marc Duez authored
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Marc Duez authored
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Marc Duez authored
work with custom germline from vidjil.data
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Marc Duez authored
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Mathieu Giraud authored
Kmer is used inside a IKmerStore<Kmer>, its constructor should thus accept the (label, stand) parameters.
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Mathieu Giraud authored
We had too few gcc warnings.
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Mikaël Salson authored
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Mikaël Salson authored
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