Fixes #2211.

See #2211.

See #2214. The should-get is not included yet as the
bug is an infinite loop it would break the build
by timing out. The should-get will be committed later.

The only options to run Vidjil are -r 1 -z 1 -g germline

Those tests were not included in our systematic testing for
a long time. This should be corrected now.

We need to be more verbose to test for variable definition

We have made the choice to put the CSS on the git
so that people (and servers) don't need to have less installed

Fixes 9cb61a95

Fixes #2205.

js/vidjil-style.js: colorGeneratorIndex(), a fixed 72-color palette with different contiguous colors

A great upcoming feature by @tydax #1921.
The feature is still under development, but we merge now to include in 'dev'
some useful refactorings.

Completes 59d52948.

Vidjil Team authored Feb 28, 2017 and Mathieu Giraud committed Mar 01, 2017

Commit performed in trio-programming: @tydax @RyanHerb @mikael-s

Vidjil Team authored Feb 28, 2017 and Mathieu Giraud committed Mar 01, 2017

The top is set to the highest possible value to ensure
that the clone will be visible.

The number of clones is set to a large arbitrary value.
May it happen that the clone doesn't appear because this
value would not be large enough?

Commit performed in trio-programming: @tydax @RyanHerb @mikael-s

Vidjil Team authored Feb 28, 2017 and Mathieu Giraud committed Mar 01, 2017

Don't rely on the fact that a clone is at the end. It is absolutely
not reliable.

Commit performed in trio-programming: @tydax @RyanHerb @mikael-s

Vidjil Team authored Feb 28, 2017 and Mathieu Giraud committed Mar 01, 2017

It is more efficient to test it outside the loop rather than inside.

Commit performed in trio-programming: @tydax @RyanHerb @mikael-s

Vidjil Team authored Feb 28, 2017 and Mathieu Giraud committed Mar 01, 2017

The previous code was fantastically overcomplicated
(which could be summarised by “WTF”).

Now we make use of the isVirtual() function to determine
is a clone can be selected.

Commit performed by trio-programming: @tydax @RyanHerb @mikael-s