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Vidjil authored Feb 16, 2018 and Mathieu Giraud committed Feb 16, 2018

See #2960, #3051.

Vidjil authored Feb 16, 2018 and Mathieu Giraud committed Feb 16, 2018

Closes #3051.

Hotfix c/3043 load custom germline

See merge request !153

link to #3043

Vidjil CI authored Feb 09, 2018 and Mathieu Giraud committed Feb 09, 2018

See vdj#603.

Vidjil CI authored Feb 09, 2018 and Mathieu Giraud committed Feb 09, 2018

See vdj#603.

link to #3043

Useful on CI as well as on CI mails.

Thanks to @mikael-s.

Reindent: Make the code more readable

See merge request !151

Cleaning some clustering aspects

See merge request !152

See #3033.

Closes #3033.

Now on should-get tests.
See #3033.

Give more auth information in the logs (for user/group creation/modification), and for the request analysis email.

Closes #2960

See merge request !143

See #3036.

Testing things in germlines (purposedly without md5).
See #3036.

J downstream sequences should also be gapped.
See #3002.

See #3034 and #3002.

See #3002.

If the wget or if the first tar fails, we should exit immediately and make
should know there was an error. Otherwise builds could appear as successful
while they were not.

Feature a/fix valgrind issues

See merge request !149

set_index() keeps track of the number of germlines refeering to it.
This is necessary so that the last germline destructor can actually
delete the index.