- 28 Apr, 2020 12 commits
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Mathieu Giraud authored
see #4270
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Mathieu Giraud authored
opens #4270
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Mikaël Salson authored
--gz makes also output AIRR .tsv.gz Closes #4249 See merge request !675
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Mathieu Giraud authored
Our main file is .vijdil, and not anymore .vdj.fa (for ages)
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Mathieu Giraud authored
closes #4249
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Mathieu Giraud authored
see #4269
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Mathieu Giraud authored
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Mathieu Giraud authored
opens #4269
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Mikaël Salson authored
Fix algo with N in window Closes #4263 See merge request !672
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Mikaël Salson authored
For some reason it was failing with my g++-5
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Mikaël Salson authored
As trimSequence is used on a representative and as the representative should contain the window we now make sure that the window is not trimmed. Fix #4263
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Mikaël Salson authored
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- 24 Apr, 2020 1 commit
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Mathieu Giraud authored
No more need to launch scripts from scripts directory See merge request !670
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- 23 Apr, 2020 26 commits
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Mikaël Salson authored
vidjil-algo: new option --gz to output .vidjil.gz Closes #4253 See merge request !667
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Mathieu Giraud authored
Docker emails Closes #2760 See merge request !666
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server/web2py/applications/vidjil/scripts/*.sh: No more need to launch scripts from the scripts/ directory Now we can launch the script from anywhere. With Docker we can even launch a script from the host using docker exec.
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Mikaël Salson authored
Render gitlab links with mkdocs-gitlab-plugin Closes #4149 See merge request !643
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Mathieu Giraud authored
see #1169
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Mathieu Giraud authored
Closes #4149
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Mathieu Giraud authored
See #4149
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Mikaël Salson authored
Sort configurations, by classification then by name, and also for admins Closes #4240 and #4241 See merge request !655
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Mathieu Giraud authored
thanks to @mikael-s
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Mathieu Giraud authored
closes #4253
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Mathieu Giraud authored
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Mathieu Giraud authored
see #4253
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Mathieu Giraud authored
see #4253
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Mikaël Salson authored
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Mikaël Salson authored
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Mikaël Salson authored
This will allow filtering depending on the server that sends emails
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Mikaël Salson authored
Otherwise the directory is created by Docker with root ownership which prevents it from being remove when stopping the environment
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Mikaël Salson authored
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Mikaël Salson authored
This is actually a bad reason: we should run tests inside containers.
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See #2760
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closes #4240
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closes #4241
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use catatnight/postfix image to provide a simple solution for error notification emails See #2760
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Mikaël Salson authored
Fix server test See merge request !668
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Mikaël Salson authored
I'm not sure that the wait_until is properly done when using a variable. Is the DOM queried each time or is it the value stored in the variable (which doesn't change)? In the second case we should modify other places in the code
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Mikaël Salson authored
As the button was disabled we couldn't click it, so we make sure it is not disabled. Additionally we wait for the query to have been performed so that the remainder can be safely checked.
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- 22 Apr, 2020 1 commit
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Mathieu Giraud authored
Doc on how the server review environment are set up See merge request !661
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