1. 04 Jul, 2018 2 commits
    • Cyprien Borée's avatar
      add transferBioReaderSequences to Filter class · 36072a47
      Cyprien Borée authored
      This method is used to transfer sequences from a BioReader to another based on
      a KmerAffect.
      
      For more informations see #3282.
      36072a47
    • Cyprien Borée's avatar
      Add isGeneric and SPECIFIC_KMERS_NUMBERS in kmerAffect · 2f64e20b
      Cyprien Borée authored
      isGeneric is a method returning true if the current K-mer is not odd (ambiguous, unknown).
      It is used instead of calling successively isAmbiguous() || isUnknown()...
      
      SPECIFIC_KMERS_NUMBER is a constant representing the amount of odd K-mers. For now there is
      only two (ambiguous/unknown) but in the future it might grow.
      
      For more informations about it, see #3282.
      2f64e20b
  2. 03 Jul, 2018 17 commits
  3. 27 Jun, 2018 3 commits
  4. 26 Jun, 2018 18 commits