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The distribution information is put in the reads entry.
We then have one entry per distribution (under a distribution entry)

Thresholds are not anymore in the number of absolute reads
but rather in the ratio of segmented reads.

This avoid to restart the whole server when modifying defs.py

Mikaël Salson authored Apr 13, 2015 and Vidjil Team committed Apr 13, 2015

Useful to get information that is only contained in the fused file (eg. reads-distribution).

We may want to get all information from the fused file. Or, at least, to
use more JSON that regex as JSON is less susceptible to changes in whitespaces than regex

Mikaël Salson authored Apr 13, 2015 and Vidjil Team committed Apr 13, 2015

The number of columns may be lower than expected (particularly when
debugging with messages containing line returns). The debug message
must still be displayed without errors.

Even if the format is expected to be Vidjil's we check if we have
an expected number of fields.

Mathieu Giraud authored Apr 12, 2015 and Vidjil Team committed Apr 12, 2015

Digging into all *.vidjil files may take some time.

Mathieu Giraud authored Apr 12, 2015 and Vidjil Team committed Apr 12, 2015

controllers/patient.py: patient/stats, fill patient/custom with some data parsed in the results file

It was reversed twice.