model.js; make model.js more independant of view.

Warning view have a better update.
Some part of this update is also splitted and moved into list.js and aligner.js

browser/js/aligner.js

@@ -526,6 +526,14 @@ Aligner.prototype = {
             
         }
 
+        var dom_content = this.m.clone(cloneID).getWarningsDom()
+        var info_align  = document.getElementById(`aligner_info_${this.m.clone(cloneID).index}`)
+        if (info_align != null) {
+            info_align.classList = dom_content.className
+            info_align.firstChild.classList = dom_content.icon
+            info_align.firstChild.title = dom_content.title
+        }
+
         this.updateDom(list)
             .updateButton()
         

browser/js/list.js

@@ -546,6 +546,14 @@ List.prototype = {
                 if (this.m.clusters[cloneID].length < 2) display = false
                 document.getElementById("cluster"+cloneID).style.display = "none";
             }
+
+            var info_list   = document.getElementById(`clone_infoBox_${clone.index}`)
+            var dom_content = clone.getWarningsDom()
+            if (info_list != null) {
+                info_list.classList = dom_content.className
+                info_list.firstChild.classList = dom_content.icon
+                info_list.firstChild.title = dom_content.title
+            }
         }
     },
     

browser/js/model.js

@@ -1615,11 +1615,7 @@ changeAlleleNotation: function(alleleNotation, update, save) {
             })
         })
 
-        this.view.forEach( (view) => {
-            if (view.id == "warnings_list") { 
-                view.update()
-            }
-        })
+        this.update()
         console.default.log(`change warn level after; ${subwarn_code}, ${current_level}`)
     },
 
@@ -1629,9 +1625,7 @@ changeAlleleNotation: function(alleleNotation, update, save) {
      */
     toogleWarningFilter: function(subwarn_code){
         this.setWarningFilterStatus(subwarn_code, !this.getWarningFilterStatusFromCode(subwarn_code))
-        this.view.forEach( (view) => {
-            if (view.id == "warnings_list") {view.update()}
-        })
+        this.update()
     },
 
     /*
@@ -1709,6 +1703,7 @@ changeAlleleNotation: function(alleleNotation, update, save) {
         }
         return false
     },
+
     /**
      * Set the filter status of a warning by his warning code
      * @param (string) warn_code The warning code to set

browser/js/warnings.js

@@ -296,21 +296,6 @@ Warnings.prototype = {
      * update all content for list and data list
      * */
     update: function () {
-        m.clones.forEach( c =>{
-            var info_list   = document.getElementById(`clone_infoBox_${c.index}`)
-            var info_align  = document.getElementById(`aligner_info_${c.index}`)
-            var dom_content = c.getWarningsDom()
-            if (info_list != null) {
-                info_list.classList = dom_content.className
-                info_list.firstChild.classList = dom_content.icon
-                info_list.firstChild.title = dom_content.title
-            }
-            if (info_align != null) {
-                info_align.classList = dom_content.className
-                info_align.firstChild.classList = dom_content.icon
-                info_align.firstChild.title = dom_content.title
-            }
-        })
 
         Object.keys(warnings_data).forEach( (category) => {
             Object.keys(warnings_data[category]).forEach( (warn_code) => {