Commit f739dc6d authored by Mathieu Giraud's avatar Mathieu Giraud

Merge branch 'doc/locus-update' into 'dev'

doc/locus.md: Update, length biais on RNA-Seq

See merge request !873
parents 601d2564 44a60ee5
Pipeline #216865 failed with stages
in 8 minutes and 31 seconds
......@@ -83,8 +83,9 @@ However, even as few as 50 bp well-centered on the CDR3 usually detect many reco
The key point, depending on the library preparation, is thus what position the CDR3 is actually in the read.
Anyway, with short reads, the identified recombinations may be skewed towards shorter sequences, such as:
- more VJ than VDJ recombinations
- shorter N and more deleted V, J and possibly D genes
- shorter N and more deleted D genes
Those biases could occur inside one locus but also favor loci/systems with shorter recombinations
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