Commit f66c044b authored by Mathieu Giraud's avatar Mathieu Giraud
Browse files

tests: 7038-long-deletions.should-vdj.fa, a probably spurious IGHV3/OR16-7*03 candidate

see #3275
parent d1c90a15
# IGHV3-30 GGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTAGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAG
# ||||||||||||||||||||||||||||||||||||||||
# IGHV3-30*01 caggtgCagCtggtggaGtctg-ggggaggcgtggtccagcctg ==> 4 sub, 213 5'-del
# . . .
# IGHV3/OR16-7*03 GaggtgCagCtggtggaGtctgCgggAGggcTtggtAcagcctC ==> 13 sub, 1 ins, 124 5'-del
# . . . . . .. . . .
# read CACAGGGGTCCAGTGTCAGGTGTAGGTGGTGGAATCTG-GGGGAGGCGTGGTCCAGCCTG
# IGHV3-30 GGAGGTCCCTgAGACTCTCCTGTGCAGCCTCTGGATTCACcTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTAGAGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAG
# ||||||||||.|||||||||||||||||||||||||||||
# IGHV3/OR16-7*03
# ggGggtcccttagactctcctgtgcagcctctgAattcacTttcagtaacgcctggatgagctgggtccgccaggctccagggaaggggctggagtgggttggccgtattaaaagcaaagctaatggtgggacaacagactacgctgcacctgtgaaaggcagat
# ||.|||||||.||||||||||||||||||||||.|||||||
# read GGAGGTCCCTAAGACTCCCCTGTGCAGCCTCTGGATTCACTGGTCACCGTCTCCTCAGGTAAG
# |||||||||||||||||||
# IGHJ1*01 GCTGAATACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG
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