Commit f121678c authored by Thonier Florian's avatar Thonier Florian Committed by Mathieu Giraud
Browse files

index.html, js/model.js: primers fictifs

parent 24ba0209
......@@ -217,6 +217,7 @@
<div class="menu_box">
primer set</br>
<div class="buttonSelector" onclick="m.switchPrimersSet('biomed2')"><input type="radio" id="primerBiomed2" name="primers" value="biomed2" /><label for="primerBiomed2">biomed2</label></div>
<div class="buttonSelector" onclick="m.switchPrimersSet('primer_fictif')"><input type="radio" id="primer_fictif" name="primers" value="primer_fictif" /><label for="primer_fictif">primer_fictif</label></div>
<!-- TODO : construire liste à partir des data disponibles/chargées dans le model.
TODO : passer ça en liste deroulante ? -->
</div>
......
......@@ -2398,6 +2398,12 @@ changeCloneNotation: function(cloneNotationType) {
this.primersSetData["biomed2"]["IGH"]["primer5"] = ["GGCCTCAGTGAAGGTCTCCTGCAAG", "GTCTGGTCCTACGCTGGTGAAACCC", "CTGGGGGGTCCCTGAGACTCTCCTG", "CTTCGGAGACCCTGTCCCTCACCTG", "CGGGGAGTCTCTGAAGATCTCCTGC", "TCGCAGACCCTCTCACTCACCTGTG", "CTGGGTGCGACAGGCCCCTGGACAA", "TGGATCCGTCAGCCCCCAGGGAAGG", "GGTCCGCCAGGCTCCAGGGAA", "TGGATCCGCCAGCCCCCAGGGAAGG", "GGGTGCGCCAGATGCCCGGGAAAGG", "TGGATCAGGCAGTCCCCATCGAGAG", "TTGGGTGCGACAGGCCCCTGGACAA", "TGGAGCTGAGCAGCCTGAGATCTGA", "CAATGACCAACATGGACCCTGTGGA", "TCTGCAAATGAACAGCCTGAGAGCC", "GAGCTCTGTGACCGCCGCGGACACG", "CAGCACCGCCTACCTGCAGTGGAGC", "GTTCTCCCTGCAGCTGAACTCTGTG", "CAGCACGGCATATCTGCAGATCAG"] ;
this.primersSetData["biomed2"]["IGH"]["primer3"] = ["CCAGTGGCAGAGGAGTCCATTC", "GTCACCGTCTCCTCAGGTA"]; // GTCACCGTCTCCTCAGGTA is a consensus sequence use because official one (CCAGTGGCAGAGGAGTCCATTC) doesn't work properly
// test fictif; sequence inclut dans les sequences de clones
this.primersSetData["primer_fictif"]["TRD"] = {};
this.primersSetData["primer_fictif"]["TRD"]["primer5"] = ["GATTTTACTCAAGGACGGTT", "GCAAAGAACCTGGCTGT", "AGATTTTACTCAAGGAC"] // V3, V2,
this.primersSetData["primer_fictif"]["TRD"]["primer3"] = ["AGGAACCCGTGTGACT", "GAACACAACTCATCGTGGA", "GAACTGGCATCAAACTCTTC"] // J1, J2, J3
// Test qunits
this.primersSetData["primer_test"]["IGH"] = {};
this.primersSetData["primer_test"]["IGH"]["primer5"] = [] // IGH seq from model_test.js
......
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