From ef122dabbc64b245fa9bfc314516207757fbed89 Mon Sep 17 00:00:00 2001
From: Mikael Salson <mikael.salson@lifl.fr>
Date: Fri, 7 Nov 2014 19:04:18 +0100
Subject: [PATCH] fasta.cpp: Use gzstream everywhere

---
 algo/core/fasta.cpp | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/algo/core/fasta.cpp b/algo/core/fasta.cpp
index 8a4c9f4c4..5473bed9e 100644
--- a/algo/core/fasta.cpp
+++ b/algo/core/fasta.cpp
@@ -59,7 +59,7 @@ void Fasta::add(istream &in, bool verbose) {
 }
 
 void Fasta::add(const string &filename, bool verbose) {
-  ifstream is(filename.c_str());
+  igzstream is(filename.c_str());
   if (is.fail())
     {
       throw invalid_argument(" !! Error in opening file: "+ filename);
-- 
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