KmerMultiSegmenter: Uniformisation (and better classification) of segmentation statuses

eafb88cb · Mikaël Salson · 40c17d5e · eafb88cb
Commit eafb88cb authored Apr 07, 2015 by Mikaël Salson
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Showing with 4 additions and 7 deletions

algo/core/segment.cpp algo/core/segment.cpp +4 -7

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--- a/algo/core/segment.cpp
+++ b/algo/core/segment.cpp
@@ -373,13 +373,10 @@ KmerMultiSegmenter::KmerMultiSegmenter(Sequence seq, MultiGermline *multigermlin
            && the_kseg->evalue_left <= threshold_nb_expected
            && the_kseg->evalue_right <= threshold_nb_expected) {
          the_kseg->setSegmentationStatus(UNSEG_TOO_FEW_ZERO);
-        }
-
-        if (the_kseg->evalue_left > threshold_nb_expected) {
-          the_kseg->setSegmentationStatus(UNSEG_NOISY); // TOO_FEW_V ?
-        }
-        if (the_kseg->evalue_right > threshold_nb_expected) {
-          the_kseg->setSegmentationStatus(UNSEG_NOISY); // TOO_FEW_J ?
+        } else if (the_kseg->evalue_left > threshold_nb_expected) {
+          the_kseg->setSegmentationStatus(UNSEG_TOO_FEW_V);
+        } else if (the_kseg->evalue_right > threshold_nb_expected) {
+          the_kseg->setSegmentationStatus(UNSEG_TOO_FEW_J);
        }
      }
 }