Skip to content
GitLab
Projects
Groups
Snippets
Help
Loading...
Help
What's new
7
Help
Support
Community forum
Keyboard shortcuts
?
Submit feedback
Contribute to GitLab
Sign in
Toggle navigation
Open sidebar
vidjil
vidjil
Commits
e966f4c1
Commit
e966f4c1
authored
Sep 14, 2018
by
Ryan Herbert
Browse files
Options
Browse Files
Download
Email Patches
Plain Diff
sample_set.py rename genescan to barplot
the barplot had nothing to do with a genescan and is just an example.
parent
e5672757
Changes
1
Hide whitespace changes
Inline
Side-by-side
Showing
1 changed file
with
2 additions
and
2 deletions
+2
-2
server/web2py/applications/vidjil/controllers/sample_set.py
server/web2py/applications/vidjil/controllers/sample_set.py
+2
-2
No files found.
server/web2py/applications/vidjil/controllers/sample_set.py
View file @
e966f4c1
...
...
@@ -668,7 +668,7 @@ def getStatHeaders():
(
'bool'
,
'parser'
,
b
),
(
'bool_true'
,
'parser'
,
b
),
(
'loci'
,
'parser'
,
l
),
(
'
genescan
'
,
'parser'
,
bc
)
(
'
barchart
'
,
'parser'
,
bc
)
]
def
getResultsFileStats
(
file_name
,
dest
):
...
...
@@ -701,7 +701,7 @@ def getFusedStats(file_name, res, dest):
dest
[
'bool'
]
=
False
dest
[
'bool_true'
]
=
True
dest
[
'loci'
]
=
[
x
for
x
in
data
[
'reads'
][
'germline'
]
if
data
[
'reads'
][
'germline'
][
x
][
result_index
]
>
0
]
dest
[
'
genescan
'
]
=
[
68
,
27
,
18
,
45
,
89
,
63
,
53
,
64
,
93
,
21
,
47
,
5
,
64
,
68
,
46
,
68
,
18
,
dest
[
'
barchart
'
]
=
[
68
,
27
,
18
,
45
,
89
,
63
,
53
,
64
,
93
,
21
,
47
,
5
,
64
,
68
,
46
,
68
,
18
,
72
,
36
,
70
,
39
,
21
,
84
,
32
,
29
,
4
,
76
,
51
,
33
,
67
,
14
,
57
,
75
,
61
,
29
,
11
,
81
,
71
,
91
,
32
,
40
,
71
,
87
,
54
,
50
,
88
,
72
,
59
,
29
,
80
,
48
,
94
,
12
,
60
,
1
,
16
,
29
,
93
,
53
,
19
,
32
,
97
,
13
,
98
,
80
,
69
,
7
,
73
,
...
...
Write
Preview
Markdown
is supported
0%
Try again
or
attach a new file
.
Attach a file
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Cancel
Please
register
or
sign in
to comment