Commit e805f259 authored by Mathieu Giraud's avatar Mathieu Giraud

Merge branch 'doc/migrator' into 'dev'

doc/server.md: example of config.json

See merge request !826
parents c9698f06 feea8180
Pipeline #176430 failed with stages
in 10 minutes and 34 seconds
......@@ -966,11 +966,37 @@ of a similar config on your server (if you don't have a similar one you should c
If you much of your imported data was on `old` configs, that you do not intend to run anymore,
a solution is to create a generic `legacy` config for these old data.
<!--
The `config.json` could thus look like:
Below is an example of such a `config.json`, linking actual configuration on the public >app.vidjil.org> server to configs to a newly installed server.
This should be completed by a mapping of other configs that were used in the migrated data.
```
{
"2": {
"description": [ "IGH", "vidjil", "-c clones -3 -z 100 -r 1 -g germline/homo-sapiens.g:IGH,IGK,IGL,TRA,TRB,TRG,TRD -e 1 -w 50 -d -y all", "-t 100 -d lenSeqAverage", "multi-locus" ],
"link_local": 6
},
"25": {
"description": [ "multi+inc+xxx", "vidjil", "-c clones -3 -z 100 -r 1 -g germline/homo-sapiens.g -e 1 -2 -d -w 50 -y all", "-t 100 -d lenSeqAverage", "default: multi-locus, with some incomplete/unusual/unexpected recombinations"
],
"link_local": 2
},
"26": {
"description": [ "multi+inc", "vidjil", "c clones -3 -z 100 -r 1 -g germline/homo-sapiens.g -e 1 -d -w 50", "-t 100", "multi-locus, with some incomplete/unusual recombinations" ],
"link_local": 3
},
"30": {
"description": [
"TRG", "vidjil", "-c clones -3 -z 100 -r 1 -g germline/homo-sapiens.g:TRG -y all", "-t 100 -d lenSeqAverage", "TRG, VgJg"
],
"link_local": 5
},
"32": {
"description": [ "multi", "vidjil", "-c clones -3 -z 100 -r 1 -g germline/homo-sapiens.g:IGH,IGK,IGL,TRA,TRB,TRG,TRD -e 1 -w 50 -d -y all", "-t 100 -d lenSeqAverage", "multi-locus" ],
"link_local": 4
}
}
```
XXXXXX mettre ici un config.json "par défaut" mappant les configs actuelles (de prod) de app sur les configs propres d'un nouveau serveur XXXX
-->
### Step 4 : prepare your server pre-process configs
......
Markdown is supported
0% or
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment