Commit e7565e18 authored by Mathieu Giraud's avatar Mathieu Giraud

core/germline.{h,cpp}: no more KEY_COMPRESS

parent 4b70b49c
......@@ -26,7 +26,7 @@ void Germline::init(string _code, char _shortcut,
affect_5 = string(1, toupper(shortcut)) + "-" + code + "V";
affect_4 = string(1, 14 + shortcut) + "-" + code + "D";
affect_3 = string(1, tolower(shortcut)) + "-" + code + "J";
filter_5 = build_automaton ? new FilterWithACAutomaton(rep_5, this->seed_5, KEYS_COMPRESS) : nullptr;
filter_5 = build_automaton ? new FilterWithACAutomaton(rep_5, this->seed_5) : nullptr;
}
......
......@@ -33,8 +33,6 @@ enum SEGMENTATION_METHODS {
#define PSEUDO_NOT_ANALYZED "not analyzed"
#define PSEUDO_NOT_ANALYZED_CODE 'z'
#define KEYS_COMPRESS 1.65 // enough for ~208 *01 genes (191 IGHV + ...) / 127
using namespace std;
using json = nlohmann::json;
......
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