Commit d9b8d851 authored by Mathieu Giraud's avatar Mathieu Giraud

Merge branch 'feature-c/2704-clone_average_reads_length' into 'dev'

scatterplot.js : replace consensus length by average reads length

See merge request !123
parents 15b03767 eed71f5d
Pipeline #11007 passed with stages
in 14 seconds
......@@ -129,9 +129,9 @@ function ScatterPlot(id, model, database, default_preset) {
"V/J (genes)" : { "mode": this.MODE_GRID, "x" : this.AXIS_GENE_V, "y": this.AXIS_GENE_J},
"V/J (alleles)" : { "mode": this.MODE_GRID, "x" : this.AXIS_ALLELE_V, "y": this.AXIS_ALLELE_J},
"V/N length" : { "mode": this.MODE_GRID, "x" : this.AXIS_GENE_V, "y": "nLength"},
"clone consensus length / locus" : { "mode": this.MODE_GRID, "x": "consensusLength", "y" : "locus"},
"clone average reads length / locus" : { "mode": this.MODE_GRID, "x": "averageLength", "y" : "locus"},
// "V/abundance" : { "mode": this.MODE_GRID, "x" : this.AXIS_GENE_V, "y": "size"},
"clone consensus length distribution" : { "mode": this.MODE_BAR, "x" : "consensusLength", "y": "size"},
"clone average reads length distribution" : { "mode": this.MODE_BAR, "x" : "averageLength", "y": "size"},
"V distribution" : { "mode": this.MODE_BAR, "x" : this.AXIS_GENE_V, "y": "size"},
"N length distribution" : { "mode": this.MODE_BAR, "x" : "nLength", "y": this.AXIS_GENE_V},
"CDR3 length distribution" : { "mode": this.MODE_BAR, "x": "lengthCDR3", "y" : "size"},
......@@ -139,7 +139,7 @@ function ScatterPlot(id, model, database, default_preset) {
"compare two samples" : { "mode": this.MODE_GRID, "x" : "size", "y": "sizeOtherSample"},
"plot by similarity" : { "mode": this.MODE_GRID, "x" : "tsneX", "y": "tsneY"},
"plot by similarity and by locus" : { "mode": this.MODE_GRID, "x" : "tsneX_system", "y": "tsneY_system"},
"clone consensus length / GC content " : { "mode": this.MODE_GRID, "x": "consensusLength", "y" : "GCContent"},
"clone average reads length / GC content " : { "mode": this.MODE_GRID, "x": "averageLength", "y" : "GCContent"},
"clone consensus coverage / GC content " : { "mode": this.MODE_GRID, "x": "coverage", "y" : "GCContent"},
"number of samples sharing each clone" : { "mode": this.MODE_GRID, "x": "nbSamples", "y" : "locus"},
// "interpolated length between BIOMED2 primers (inclusive)" : { "mode": this.MODE_BAR, "x": "primers", "y" : "size"},
......
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