Mise à jour terminée. Pour connaître les apports de la version 13.8.4 par rapport à notre ancienne version vous pouvez lire les "Release Notes" suivantes :
https://about.gitlab.com/releases/2021/02/11/security-release-gitlab-13-8-4-released/
https://about.gitlab.com/releases/2021/02/05/gitlab-13-8-3-released/

Commit d7302896 authored by Mathieu Giraud's avatar Mathieu Giraud

task.py: mixcr, remove .vdjca files when there are no longer used

parent fe822216
......@@ -329,6 +329,7 @@ def run_mixcr(id_file, id_config, id_data, id_fuse, clean_before=False, clean_af
cmd = mixcr + ' align --save-reads -t 1 -r ' + align_report + ' ' + args_1 + ' ' + seq_file + ' ' + out_alignments
cmd += ' && '
cmd += mixcr + ' assemble -t 1 -r ' + assembly_report + ' ' + args_2 + ' ' + out_alignments + ' ' + out_clones
cmd += ' && rm ' + out_alignments
cmd += ' && '
cmd += mixcr + ' exportClones --format vidjil -germline -id -name -reads -sequence -top -seg -s ' + args_3 + ' ' + out_clones + ' ' + out_results
......
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