Commit d4761b2f authored by Mikaël Salson's avatar Mikaël Salson

Segment: Add a new unsegmentation cause: UNSEG_AMBIGUOUS

It happens when we have V and J labels but when we're not able to segment because one
of the criteria on the number of V compared to J is not fulfilled
parent 701deb25
......@@ -22,13 +22,13 @@ using namespace std;
enum SEGMENTED { DONT_KNOW, SEG_PLUS, SEG_MINUS, UNSEG_TOO_SHORT, UNSEG_STRAND_NOT_CONSISTENT,
UNSEG_TOO_FEW_ZERO, UNSEG_TOO_FEW_V, UNSEG_TOO_FEW_J,
UNSEG_BAD_DELTA_MIN, UNSEG_BAD_DELTA_MAX,
UNSEG_BAD_DELTA_MIN, UNSEG_BAD_DELTA_MAX, UNSEG_AMBIGUOUS,
TOTAL_SEG_AND_WINDOW,
TOTAL_SEG_BUT_TOO_SHORT_FOR_THE_WINDOW,
STATS_SIZE } ;
const char* const segmented_mesg[] = { "?", "SEG_+", "SEG_-", "UNSEG too short", "UNSEG strand",
"UNSEG too few (zero)", "UNSEG too few V", "UNSEG too few J",
"UNSEG < delta_min", "UNSEG > delta_max",
"UNSEG < delta_min", "UNSEG > delta_max", "UNSEG ambiguous",
"= SEG, with window",
"= SEG, but no window",
} ;
......
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