From d474b3ab8523b80038624ac5dfb23cb45f7bf38d Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Cyprien=20Bor=C3=A9e?= Date: Tue, 12 Jun 2018 19:47:51 +0200 Subject: [PATCH] Change FineSegmenter new parameter description For more informations see #3268 --- algo/core/segment.h | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/algo/core/segment.h b/algo/core/segment.h index 91bdf91a0..3036f298f 100644 --- a/algo/core/segment.h +++ b/algo/core/segment.h @@ -359,7 +359,10 @@ class FineSegmenter : public Segmenter * Build a fineSegmenter based on KmerSegmentation * @param seq: An object read from a FASTA/FASTQ file * @param germline: germline used - * @param kmer_threshold: The number of the best k-mers for filtering. + * @param kmer_threshold: This threshold is used while filtering the V + * BioReader in Germline. If this value is 0, every K-mer from getMultiResults + * is used for the filtering. Otherwise if N > 0, the N best K-mers are used + * for the filtering. * By default this parameter doesn't filter the germline. */ FineSegmenter(Sequence seq, Germline *germline, Cost segment_cost, -- GitLab