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vidjil
vidjil
Commits
c8d2b8e2
Commit
c8d2b8e2
authored
Jul 12, 2018
by
Mathieu Giraud
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c8d2b8e2
Vidjil is an open-source platform for the analysis of high-throughput sequencing data from lymphocytes,
developed by the Bonsai bioinformatics lab, at CRIStAL (UMR CNRS 9189, Université Lille) and Inria Lille.
# Credits
Contact: Mathieu Giraud and Mikaël Salson
\<
contact@vidjil.org
\>
Vidjil is an open-source platform for the analysis of high-throughput sequencing data from lymphocytes, developed and maintained by
the
[
Bonsai bioinformatics lab
](
http://cristal.univ-lille.fr/bonsai
)
at CRIStAL (UMR CNRS 9189, Université Lille) and Inria Lille
and the
[
VidjilNet consortium
](
http://www.vidjil.net
)
at Fondation Inria.
# Vidjil core development
Contact:
[
Mathieu Giraud and Mikaël Salson
](
mailto:contact@vidjil.org
)
-
Mathieu Giraud, 2011-2017
-
Mikaël Salson, 2011-2017
## Vidjil core development
-
Mathieu Giraud, 2011-2018
-
Mikaël Salson, 2011-2018
-
Marc Duez, 2012-2016
-
Tatiana Rocher, 2014-2017
-
Florian Thonier, 2015-201
7
-
Ryan Herbert, 2015-201
7
-
Florian Thonier, 2015-201
8
-
Ryan Herbert, 2015-201
8
-
Aurélien Béliard, 2016-2017
# Other contributors
#
#
Other contributors
-
David Chatel, 2011-2012
-
Antonin Carette, 2014
...
...
@@ -22,13 +25,14 @@ Contact: Mathieu Giraud and Mikaël Salson \<contact@vidjil.org\>
-
Amina Boussalia and Fabien Fache, 2016
-
Eddy El Khatib and Nicolas Berveglieri, 2017
-
Téo Vasseur, 2017
-
Cyprien Borée, 2018
#
.should-vdj.fa
tests with curated V(D)J designations
#
# `.should-vdj.fa`
tests with curated V(D)J designations
-
Yann Ferret (CHRU Lille), 2014-2015
-
Florian Thonier (Inserm, Paris Necker), 2015-2016
# Acknowledgements
#
#
Acknowledgements
We thank all our users, collaborators and colleagues who provided feedback on Vidjil and proposed new ideas.
Our special thanks go to:
...
...
@@ -51,17 +55,18 @@ Vidjil is developed in collaboration or in connection with the following groups:
-
Institut Necker Enfants Malades, Paris
-
EuroClonality-NGS working group
# Funding
#
#
Funding
The development of Vidjil is funded by:
-
Région Nord-Pas-de-Calais/Hauts-de-France, 2012-2017
-
Université Lille 1, 2014-2017
-
SIRIC ONCOLille (Grant INCa-DGOS-Inserm 6041), 2014-2017
-
Inria Lille, 2015-2017
-
InCA, 2016-2017
-
Inria Lille, 2015-2018
-
InCA, 2016-2018
-
VidjilNet consortium, 2018
# Reference
#
#
Reference
Marc Duez et al.,
“Vidjil: A web platform for analysis of high-throughput repertoire sequencing”,
...
...
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