Skip to content
GitLab
Projects
Groups
Snippets
/
Help
Help
Support
Community forum
Keyboard shortcuts
?
Submit feedback
Contribute to GitLab
Sign in
Toggle navigation
Menu
Open sidebar
vidjil
vidjil
Commits
c6a57bd9
Commit
c6a57bd9
authored
Mar 30, 2021
by
Mathieu Giraud
Browse files
core/windowExtractor.cpp: better bikeshed .affect format
thanks to
@mikael-s
parent
44203108
Changes
1
Hide whitespace changes
Inline
Side-by-side
algo/core/windowExtractor.cpp
View file @
c6a57bd9
...
...
@@ -54,7 +54,8 @@ WindowsStorage *WindowExtractor::extract(OnlineBioReader *reads,
if
(
out_affects
)
{
Sequence
seq
=
reads
->
getSequence
();
*
out_affects
<<
">"
<<
setw
(
11
)
<<
left
<<
seq
.
label
<<
" "
<<
seq
.
sequence
<<
endl
;
*
out_affects
<<
">"
<<
seq
.
label
<<
endl
<<
setw
(
13
)
<<
" "
<<
seq
.
sequence
<<
endl
;
}
KmerMultiSegmenter
kmseg
(
reads
->
getSequence
(),
multigermline
,
out_affects
,
nb_expected
,
nb_reads_for_evalue
);
...
...
Write
Preview
Supports
Markdown
0%
Try again
or
attach a new file
.
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Cancel
Please
register
or
sign in
to comment