Commit b91b8023 authored by Mathieu Giraud's avatar Mathieu Giraud Committed by Mikaël Salson

doc/algo.org, vidjil.cpp: mentions .gz support

parent 58532415
......@@ -138,7 +138,7 @@ extern int optind, optopt, opterr;
void usage(char *progname)
{
cerr << "Usage: " << progname << " [options] <reads.fa>" << endl << endl;
cerr << "Usage: " << progname << " [options] <reads.fa/.fq/.gz>" << endl << endl;
cerr << "Command selection" << endl
<< " -c <command> \t" << COMMAND_WINDOWS << " \t window extracting" << endl
......
......@@ -70,7 +70,8 @@ make test # run self-tests
* Input and output files
The main input file of Vidjil is a /set of reads/, given as a =.fasta=
or =.fastq= file. This set of reads can reach several gigabytes. It is
or =.fastq= file, possibly compressed with gzip (=.gz=).
This set of reads can reach several gigabytes. It is
never loaded entirely in the memory, but reads are processed one by
one by the Vidjil algorithm.
......
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